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SCNpilot_expt_1000_bf_scaffold_1159_curated_69

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 70234..71262

Top 3 Functional Annotations

Value Algorithm Source
General L-amino acid-binding periplasmic protein AapJ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUA0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 342.0
  • Bit_score: 561
  • Evalue 6.40e-157
General L-amino acid-binding periplasmic protein AapJ {ECO:0000313|EMBL:EYR79977.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 342.0
  • Bit_score: 561
  • Evalue 9.00e-157
aapJ; general L-amino acid-binding periplasmic ABC transporter protein; K09969 general L-amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 342.0
  • Bit_score: 554
  • Evalue 1.90e-155

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGAAGAAGAAGCTTCTGTCGGCGATGATCGGCGCGGCCGTCCTTGGAGTTGGCGCTCCGGCTGCTTTTGCGGGCAAACTCGACGACGTCAAGGCCAAGGGATTCATTCAATGCGGCGTCAACGGCGCCGGCCTGCTCGGTTTTGCCTCTCAGGACAGCAGCGGCAACTGGTCCGGCCTCGACATCGATTACTGCAAAGCCGTCGCCGCTGCCGTTTTCGGCGATGCGACCAAGGTGAAATATACGCCGCTTTCGGCCAAGGATCGCTTTCCGGCGCTTCAGTCTGGCGAAATCGATCTTCTGTCGCGCAACACCACCTGGACGATCAGCCGCGACACGCAGCTCGGCTTCAACTTCCGCACCGTCAACTATTATGACGGCCAGGGATTCATGGCCCGCAAGGAGCTTGGCGTGAAATCGGCGCTGGAATTGTCGGGCGCCACTGTCTGCGTGCAGAGCGGCACCACCACCGAACTCAACCTGGCCGACTACTTCAAGGCCAACAAGATGGAATACAAGCTGACCGTCTTCGAAAAGCAGGACGAGGTGGACCAGGCTTATGACGCCGGCAAGTGCGACGTCTACACCACCGACCAGTCGGGCCTGTATGCCATCCGACTGACGCTGTCCAAGCCGGACGATCATATCATCCTGCCGGAAATCATCTCCAAGGAGCCGCTCGGACCGGCCGTCCGCCAGGGCGACGACCAGTGGTTCGATATCGTGAGCTGGGCCCATTACGCCATGGTCGCCGCCGAGGAATTCGGCATCACCCAGGCCAATGTCGACGAGATGAAGTCCTCCACAAACCCGGACATCAAGCGTTTCCTCGGCACCGAGGAAGGTTCGACCATCGGCAAGGATCTGGGCGTCGACAGTGCCTGGGCCTACAATATCATCAAGCAGGTCGGCAATTACGGTGAATCCTTCGACCGCAACGTCGGTGAAGGCAGCAAGCTGAAGATTGCCCGTGGCCTCAACGCCCTGTGGACGAAGGGCGGCCTGCAATACGCACCGCCGATTCGCTGA
PROTEIN sequence
Length: 343
MKKKLLSAMIGAAVLGVGAPAAFAGKLDDVKAKGFIQCGVNGAGLLGFASQDSSGNWSGLDIDYCKAVAAAVFGDATKVKYTPLSAKDRFPALQSGEIDLLSRNTTWTISRDTQLGFNFRTVNYYDGQGFMARKELGVKSALELSGATVCVQSGTTTELNLADYFKANKMEYKLTVFEKQDEVDQAYDAGKCDVYTTDQSGLYAIRLTLSKPDDHIILPEIISKEPLGPAVRQGDDQWFDIVSWAHYAMVAAEEFGITQANVDEMKSSTNPDIKRFLGTEEGSTIGKDLGVDSAWAYNIIKQVGNYGESFDRNVGEGSKLKIARGLNALWTKGGLQYAPPIR*