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SCNpilot_expt_1000_bf_scaffold_1159_curated_71

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 72549..73703

Top 3 Functional Annotations

Value Algorithm Source
amino acid ABC transporter permease n=1 Tax=Rhizobium giardinii RepID=UPI0003617AAD similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 378.0
  • Bit_score: 585
  • Evalue 3.60e-164
Amino-acid transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CCF19780.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 378.0
  • Bit_score: 582
  • Evalue 5.50e-163
aapM; general L-amino acid ABC transporter, permease; K09971 general L-amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 382.0
  • Bit_score: 566
  • Evalue 5.40e-159

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Taxonomy

Rhizobium sp. → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1155
ATGGCAATGGTTACACCCTTTATGCGCACCGACATGCTGGAGCCGGAACAGGCTCCCCGCCAGGAAAGCGGCGTCATCGGCTGGCTGCGGCACAACCTGTTCGGCTCGATCTTCGATTCGGTGCTGACGATTCTAGCGCTGCTTTTCCTGATCGCGCTTCTGCCGCCCATCTTCGAGTGGCTGTTCGTCAACGCCACCTGGAGCGGCGCAGACCGCTCCGTCTGCGCCACGGTGGCGCAGGGCGGCACGCAGCCGGATGGCTGGAGCGGCGCCTGCTGGGCCTATGTCGGCGATTACTTCCAGCAATTCATGTACGGCACTTACCCCATGGACCAACGCTGGCGGCCATCGCTGGTGGCGGCGCTGTTCGTCATACTGTTGGCGCCTTTGTTGATTCCCAAGGTTCCACACAAGGGCTGGAATGCGCTGGCACTGTTCGTCGTCTTCCCGATCATCGCGGCCATCCTGCTGCTCGGCGGTGTCTTCGGACTGCCCTTTGTCGAGACCGCCATGTGGGGCGGGCTGATGGTGACGCTGATCATTTCCTTCGTCGGCATCGCCGTGTCCCTGCCCTTCGGCATCCTGCTGGCGCTCGGGCGACGCTCGAAGATGCCGGTCATCAAGATGCTGTGCGTCGCCTTCATCGAACTGATCCGCGGCGTACCGCTGATCACCGTCCTGTTCATGGCCAGCGTCATGCTGCCGCTGTTCCTGCCGGCCGGCTGGACGATCGACAAGCTGCTGCGCGCCCTGGTCGGGGTGTCGATCTTCGCGTCGGCCTATATGGCGGAAGTCATTCGCGGCGGCCTGCAAGCCGTTCCGAAGGGCCAGTATGAAGGCGCCGACTCGCTCGGGCTCAGCTATTGGCAGAAAATGCGCCTGGTCGTCATGCCGCAGGCGATCAAGCTGGTCATCCCCGGCATCGTCAACACCTTCATCGGCATGTTCAAGGATACGTCGCTGGTGTCGATCATTTCGATGTACGATCTGCTGGGCATCGTGAAGAAAAGTTTCAGCGATCCGACCTGGGTATCGCCGGTGACCTCCTTGACGGGGCTTGTCTTCGCCGGCACTGTCTTTTGGCTTTTCTGCTTCGGCATGTCCAGATATTCCGGCTTCATGGAGCGGCATCTGGATACCGGACACAAACGATAA
PROTEIN sequence
Length: 385
MAMVTPFMRTDMLEPEQAPRQESGVIGWLRHNLFGSIFDSVLTILALLFLIALLPPIFEWLFVNATWSGADRSVCATVAQGGTQPDGWSGACWAYVGDYFQQFMYGTYPMDQRWRPSLVAALFVILLAPLLIPKVPHKGWNALALFVVFPIIAAILLLGGVFGLPFVETAMWGGLMVTLIISFVGIAVSLPFGILLALGRRSKMPVIKMLCVAFIELIRGVPLITVLFMASVMLPLFLPAGWTIDKLLRALVGVSIFASAYMAEVIRGGLQAVPKGQYEGADSLGLSYWQKMRLVVMPQAIKLVIPGIVNTFIGMFKDTSLVSIISMYDLLGIVKKSFSDPTWVSPVTSLTGLVFAGTVFWLFCFGMSRYSGFMERHLDTGHKR*