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SCNpilot_expt_1000_bf_scaffold_1159_curated_74

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 75709..75918

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=5 Tax=Rhizobium/Agrobacterium group RepID=Q7CRN4_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 69.0
  • Bit_score: 126
  • Evalue 8.20e-27
cspA2; Cold shock protein, DNA binding similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 69.0
  • Bit_score: 126
  • Evalue 2.60e-27
Cold-shock protein {ECO:0000313|EMBL:KGE81166.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 69.0
  • Bit_score: 126
  • Evalue 1.20e-26

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Taxonomy

Rhizobium sp. H41 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGAACACAGGTACCGTCAAGTGGTTCAACAGCACCAAGGGTTATGGCTTCATCCAGCCGGATAACGGCGGCCAGGACGTCTTCGTTCACATCTCCGCTGTCGAGCGTTCGGGCATGTCGTCGCTGACCGACGGCCAGAAGGTTTCCTATGAAATCATTCAGGATCGTCGCTCGGGCAAGAGCTCGGCCGGCAACCTCAGCGCCGCCTGA
PROTEIN sequence
Length: 70
MNTGTVKWFNSTKGYGFIQPDNGGQDVFVHISAVERSGMSSLTDGQKVSYEIIQDRRSGKSSAGNLSAA*