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SCNpilot_cont_500_bf_scaffold_103_curated_13

Organism: scnpilot_dereplicated_Rhizobiales_7

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(10126..10686)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035C3C64 similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 185.0
  • Bit_score: 295
  • Evalue 4.70e-77
RNA polymerase sigma factor {ECO:0000313|EMBL:KJC49410.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 185.0
  • Bit_score: 295
  • Evalue 3.80e-77
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 185.0
  • Bit_score: 293
  • Evalue 4.30e-77

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Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGCAAACGACATCAGACGAAATCCTGATCGGGCGCATCGCCAAAGGCGATCGGCTCGCGATGCAGGTGCTGTACGCACGGCACCACGTGAAAGTGTTCCGTTTCGTGCTGCGGCTCGTCCGCAACGAGGCGACCGCGGAAGACCTCATCAGCGAGGTGTTCCTGGACGTGTGGCGTCAGGCCGGAAAGTTCGAGGGGCGGTCCGCCGCCACGACCTGGATCCTGGCGATCGCGCGGTTCAAGGCGCTGTCGGCGCTGCGCAAGCGGCCCGAACAGGAACTGGACGAGGAAGCGGCGGAGGCGATCCCGGATCAGAGCGACGATCCCGAGACCGCCACCGCGAAGAAAGACAAGAGTGAGGCCCTGCGGCGTTGTTTGCAGGGACTGTCGGCTGAACATCGCGAGATCGTGGACCTTGTCTACTATCACGAGAAATCGGTCGAGGAGGTTGCCGCGATCGTCGGCATCCCCGAAGCGACGGTGAAAACGCGGATGTTCTACGCCCGCAAGAAACTGTCGGAACTCTTGAAGGCGCAAGGCATAGATCGAGGATGGCCGTGA
PROTEIN sequence
Length: 187
MQTTSDEILIGRIAKGDRLAMQVLYARHHVKVFRFVLRLVRNEATAEDLISEVFLDVWRQAGKFEGRSAATTWILAIARFKALSALRKRPEQELDEEAAEAIPDQSDDPETATAKKDKSEALRRCLQGLSAEHREIVDLVYYHEKSVEEVAAIVGIPEATVKTRMFYARKKLSELLKAQGIDRGWP*