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SCNpilot_cont_500_bf_scaffold_347_curated_18

Organism: scnpilot_dereplicated_Rhizobiales_7

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 16512..16715

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F1F902 similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 66.0
  • Bit_score: 121
  • Evalue 2.60e-25
Cold-shock protein {ECO:0000313|EMBL:ETR75047.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 67.0
  • Bit_score: 121
  • Evalue 3.60e-25
cold-shock protein, DNA-binding; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 84.8
  • Coverage: 66.0
  • Bit_score: 117
  • Evalue 1.50e-24

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGCCTCAGGGCACCGTTAAGTGGTTTAATCCGACTAAGGGCTACGGCTTCATCCAACCGCAGGAAGGCGGGAAGGATGTGTTCGTGCACATTTCGGCCGTGGAACGCGCCGGGTTGAGCACCCTAAACGAAGGTCAGTCCGTCCAGTACGAACTCGTCGAAAATCGCGGCAAGGTCTCTGCTGAGAACCTGAAGGTTAAGTAG
PROTEIN sequence
Length: 68
MPQGTVKWFNPTKGYGFIQPQEGGKDVFVHISAVERAGLSTLNEGQSVQYELVENRGKVSAENLKVK*