ggKbase home page

SCNpilot_cont_500_bf_scaffold_4_curated_21

Organism: scnpilot_dereplicated_Rhizobiales_7

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(23205..24029)

Top 3 Functional Annotations

Value Algorithm Source
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VLR5_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 267.0
  • Bit_score: 332
  • Evalue 5.10e-88
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 267.0
  • Bit_score: 332
  • Evalue 1.60e-88
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD {ECO:0000313|EMBL:ADU43426.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 267.0
  • Bit_score: 332
  • Evalue 7.10e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
TTGCTCGGCTTTCTGCCGGTGAACGCCCTCAAGACCATGACCGCCTTCCAGCCCGACTCGTTCGTCGTCTCCGACGTCGTTCCGTCGCCCAATTTCGATCAGCGCAAAGACGGTATGCAGCCGGACATGATCCTGCTGCACTACACCGGCATGATCGACGATCAGGCGGCGCTGACGCGGCTGTGCGACCCGGATGCCAAGGTGTCAGCCCACTACGTCGTTTTCCCGGACGGCCGTATCGTCCAGTGTGTGCCGGAACGCGAGCGCGCCTGGCACGCCGGCGTCTCGTCGTGGGATGGAGACACCGACATCAATTCGCATTCCATCGGCATCGAGATCTGCAATCCCGGCCACGATCACGGCTATCCGCCGTTTCCGCTGCGCCAGATCGCCGCGGTGATCTCGCTGTGCAAGGGCATTCTCGCCCGTCGCGACACTATCCCGAACGATCGCGTGCTGGCGCATTCGGACGTCGCACCGGCGCGCAAGCAGGATCCCGGCGAGAAATTCCCGTGGGCGACACTGGCCGATTCCGGCGTCGGCCACTGGGTGCGCCCCGCACCGCTGAAGCTTGAAGGGCCACGGCTTGGACCCGGCGACCTCGGCAACGATGTCGCGCAATTCCAGCGCATGCTGGCCGATTTCGGTTATGCTCAGCCGGTCAGCGGCGACTACGACGAGGCCATGGCGACGGTCGTCACCGCATTCCAGCGCCATTTCCGTCCGGACTGCGTCGATGGCATCGCCGACGCCTCGACCCAGATGACGCTGCGCGCCCTGCTGGAAACCCGCGCACGCCCGGAACGGGCGAAACAATCGATATAA
PROTEIN sequence
Length: 275
LLGFLPVNALKTMTAFQPDSFVVSDVVPSPNFDQRKDGMQPDMILLHYTGMIDDQAALTRLCDPDAKVSAHYVVFPDGRIVQCVPERERAWHAGVSSWDGDTDINSHSIGIEICNPGHDHGYPPFPLRQIAAVISLCKGILARRDTIPNDRVLAHSDVAPARKQDPGEKFPWATLADSGVGHWVRPAPLKLEGPRLGPGDLGNDVAQFQRMLADFGYAQPVSGDYDEAMATVVTAFQRHFRPDCVDGIADASTQMTLRALLETRARPERAKQSI*