ggKbase home page

SCNpilot_cont_1000_bf_scaffold_425_curated_20

Organism: scnpilot_dereplicated_Rhizobiales_1

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 11 / 38 MC: 1
Location: 24584..25660

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DD9D3C similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 356.0
  • Bit_score: 419
  • Evalue 4.10e-114
putative Spermidine/putrescine ABC transpoter (substrate binding protein) similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 355.0
  • Bit_score: 415
  • Evalue 1.90e-113
Putative Spermidine/putrescine ABC transpoter (Substrate binding protein) {ECO:0000313|EMBL:CCD01770.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 355.0
  • Bit_score: 415
  • Evalue 8.30e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Azospirillum brasilense → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
ATGTCCGATAGCAGAAGCAAGTTCTTTTCATTCGAGCCCAACCGCAGGACCTTTCTCGCAGGAGCGGGGTTGGCGGTGGCGGGCATGGCGATGGGCCCTCGCGACGCGGCCAAGGCGGCCGGGCGTATCACGGTCGCCGATCCCGGCGGGCCCTATTCGATCGGTTTCGGTGAAGCGTTCTACAAGCCCTTTCAGGCCGACACCGGGATCGAGGTAATAGGCGTGGCGCGCCAGGCGGAGCCGACCAGTCAGGTGAAGGCCATGGTCGAAGCGAAATCCTATCTTTGGGACGTTGTCTCGCTCACGCTTTCCTCGCGCAAGCTCCTCTCCGACCAGGGGCTTCTGGAGCCTCTCGACTGGAACAACGCCGACATGAAGGCGCTGATCAAACCGGCGCAGCAACCGGATTGGATGGGGACCAATGTCTATGGCAGCATCCTCGCCTACCGGGCGGACAATATGAAGAACAAGCCGGGGAGTTGGGCGGACTTCTACGATGTGGAGGGCTTCCCAGGACGCCGCGCCTTGCCGAAGAGTCCTATCCACACGCTGGAAGGGGCGCTTCTCGCGGACGGAGTTGCGTTGGACAAGCTCTATCCCCTCGATGTTGACCGTGCCTTCAAGAAGCTCGACCAGATCAAGCCCCATATCAATGTCTGGTGGGCAAGCTTCGGCCAGTCGACGCAATTGCTGCAGAGCGGCGAGGTGGATTTCCTCGCCACCAGCAATGCGCGCGCCCAGGCGGCGATCGACAGCGGCAGCGACGTCAAACTAATCTGGAAGCAGGCACTCTTCGGGCTCGAGGGCTGGGCCATTCCCAAGGGAACGCCGAATGCCGATCTGGCCCGAAAATTCATTGCCTACTGCGCCAACGGCAAGCGACAGGCCGTCTATACCAAGGTGCTTGGCTACGGTCCCACCAATCAATCGGCGTTCGAGTATATTCCTGCGGAACGGGCCGCCCAGCTCCCCTCGGCGCCTGAGAATTTCAAGCAGATGGTGCAGATAAACGACGATTGGTGGGGGGCCAACAAGGATAAGATGTTCGATCGCTTCAACGCGTGGCTGTTGCGCTGA
PROTEIN sequence
Length: 359
MSDSRSKFFSFEPNRRTFLAGAGLAVAGMAMGPRDAAKAAGRITVADPGGPYSIGFGEAFYKPFQADTGIEVIGVARQAEPTSQVKAMVEAKSYLWDVVSLTLSSRKLLSDQGLLEPLDWNNADMKALIKPAQQPDWMGTNVYGSILAYRADNMKNKPGSWADFYDVEGFPGRRALPKSPIHTLEGALLADGVALDKLYPLDVDRAFKKLDQIKPHINVWWASFGQSTQLLQSGEVDFLATSNARAQAAIDSGSDVKLIWKQALFGLEGWAIPKGTPNADLARKFIAYCANGKRQAVYTKVLGYGPTNQSAFEYIPAERAAQLPSAPENFKQMVQINDDWWGANKDKMFDRFNAWLLR*