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SCNpilot_cont_1000_bf_scaffold_301_curated_16

Organism: scnpilot_dereplicated_Rhizobiales_1

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 11 / 38 MC: 1
Location: 8002..9012

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 336.0
  • Bit_score: 638
  • Evalue 7.40e-180
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 336.0
  • Bit_score: 631
  • Evalue 1.60e-178
DNA-directed RNA polymerase subunit alpha n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVC9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 336.0
  • Bit_score: 638
  • Evalue 5.30e-180

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGATCCAGAAAAATTGGCAGGAACTCATCAAGCCGAACAAGGTGGAGTTCTCCTCCAAGGGCAAGACGATGACGACGCTGGTGGCCGAGCCGCTGGAGCGTGGCTTCGGCCTCACCCTCGGCAACGCGCTGCGGCGCGTGCTGCTTTCGTCGCTCCGCGGCGCCGCCGTGACGGCGGTCCAGATCGACGGCGTGCTGCATGAATTCTCCTCGATCTCGGGCGTCCGCGAGGATGTGACCGACATCGTGCTCAACATCAAGGAAATCGCCATCAAGATGGAAGGCGACGGGCCGAAACGCATGGTCGTGCGCAAGCAGGGCCCGGGCGTCGTCACCGCCGGCGACATCCAGACGGTGGGCGATGTCGAGATCCTGAACCCCGACCACATCATCTGCACGCTCGACGAGGGTGCGGAGATCCGCATGGAATTCACCGTCGACAGCGGCAAGGGCTACGTGCCCGCCGAGCGCAACCGCGCCGAGGACGCGCCGATCGGCCTGATCCCCGTCGACAGCCTCTATTCGCCGGTCAAGAAGGTCTCCTACAAGGTCGAGAACACCCGCGAGGGGCAGGTTCTCGACTACGACAAGCTGACCATGACGATCGAGACCGACGGTTCGGTCACGGGCGAGGACGCGGTGGCGTTCGCCGCGCGCATCCTGCAGGACCAGCTCGCGCTGTTCGTCAATTTCGAGGAGCCGCACAAGGAACAGCCGCAGGAGCAGGTCACCGAGCTCGCGTTCAATCCGGCGCTGCTCAAGAAGGTCGACGAGCTCGAGCTTTCGGTGCGTTCGGCCAACTGCCTGAAGAACGACAACATCGTCTATATCGGCGACCTGATCCAGAAGACGGAAGCCGAGATGCTGCGCACGCCGAATTTCGGCCGCAAGTCGCTGAACGAGATCAAGGAAGTGCTCGCCGCCATGGGCCTGCATCTCGGCATGGAAGTGCCGGATTGGCCGCCGGAGAACATCGAAGATCTCGCCAAGCGCTACGAAGACCAATATTGA
PROTEIN sequence
Length: 337
MIQKNWQELIKPNKVEFSSKGKTMTTLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAVQIDGVLHEFSSISGVREDVTDIVLNIKEIAIKMEGDGPKRMVVRKQGPGVVTAGDIQTVGDVEILNPDHIICTLDEGAEIRMEFTVDSGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKVSYKVENTREGQVLDYDKLTMTIETDGSVTGEDAVAFAARILQDQLALFVNFEEPHKEQPQEQVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVLAAMGLHLGMEVPDWPPENIEDLAKRYEDQY*