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SCNpilot_cont_300_bf_scaffold_2550_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_4

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(2..3205)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane autotransporter n=1 Tax=Pseudomonas fluorescens R124 RepID=K0WDA8_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 31.6
  • Coverage: 999.99
  • Bit_score: 400
  • Evalue 4.50e-108
Autotransporter-associated beta strand {ECO:0000313|EMBL:EZP43719.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.9
  • Coverage: 999.99
  • Bit_score: 404
  • Evalue 3.30e-109
outer membrane autotransporter barrel domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 999.99
  • Bit_score: 396
  • Evalue 2.00e-107

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3204
ATGCAGCGGTCGCATTTTTCGCGTCATGACGGCGGATCGAGCCTGAAAAAAGGCTGGCTTTCCAGCACGTCGCTGCCTTTGGCCGCGATCATCGCCGCGATGGCGATCTCCCAGCCTGCTCTCGCCAATGGCGGCGACGTGACGAACGGGTCCGGAGGCGCTTCCGGCCTTGGCGGCGTTGATTCGACGACGGGAGCGGGGGGAAACGGAGCGACAGGCCCCGACAGTAGCGGCAGCGGCGGCGGCGCAGGCGTTGGGGCAGGGGGAGCCGGAGGAGCAGGGGGCTTCTTTGGCGGCGCCGGTGGCGCTGGCGGCGTCCACGGCGTTGTTGTCAACGGGGTTGACATCGGCGCCGCCTCGGCAGGCACAGACGGTGGAAATGGCGCTTCGGGGGCTCCCGATGGCGGCGGCGGCGGCGGCGCCGGTGGTTATGGCGCGGTGGTCAGCGGGACGGTGGGCGTCAATGCGGCGGTCACTGGCGGCAATGGTGGTAGCGGCGGGCTGGGATCGGCCTTTCGGGGCGGCGGCGGCGGCAGCGGCGGTTATGGCGTCTTCCTGAATACGGGCGGCGTGCTCACCAACAATTCCACGATCACCGGCGGCAATGGCGGCGGCGGCGCGTATTTGGGACCCGGGCCAAGCGGAGCCGGCGTGTTCGGCGACGCCGGCGGCGTCTCCATCATCAACAATGGGACCATCGTAGGCGGCGCGGGCGCCAATGCGATCACCTTCGCCGGCGGCGCGAACGCGCTGACGCTTGGCGCGGGAACGCTGACCGGGAATATCGGCGTCAATGGCGGCGGCTCTGTCAATTTCAATGATGCGGCGGGCGCTAGCACGCTCGCGAACGTGATCACGGGCAACGGCTCGATCGAGAAGACGGGCGCCGCGACTCTCAACCTGACCGGCGTCAATACCTATTCCGGCTCCACGACGATCAGCGCTGGCGTGCTTGGCGCGAATTCGACAGCTTCGCTCGGCGATGGAAGCGCCACCAACACACTGATCTTCAATGGCGGCTCGTTGCAGACGCTGGACAACATGGCCTTCGCGGCGACCCGAAGCGTGTCTGTCATCGGCTCGGGCACGATCGATACCGCCGGCAACACGCTCTCTATCGCCGGCGTGATCAGCGGCGCGGGCGCTTTGACGAAATCCGGCGCGGGAATTCTGGCGCTGTCCGGGAACAATGCCGGATTCTCGGGCGGCATCACAGTCGCCGCCGGCACGCTGTCGCTCCAGAACGACAACGCCGCCGGCACGGGCGCTATCACGACGACGGGATCAGTAATCGATTACGCCAACGGCGTGACCATCGCCAATCCGATCGTGATCAGCAGCAACACGACGCAGTTGCAGACGCTCACGGGCGTGACGGCGACGCAGAGCGGCGTGATTTCCGAGGATGTCGCGGGCCGGCCGCTGGAGAAGATCGGCGCGGGGACGCTGATCCTGTCGGGCGCCAACACCTATACAGGCGCGACGACGATCACGGATGGCGCGCTGTCCGTCGCCGCGGACAACAATCTCGGCGCCGGTGGCCCGCTCGTCTTCAACGGCGGATCGCTGCGGACGACGGCGAGCTTCACGTCGGCGCGCGCGGTCACGGCCAATGCGCCTGGCGCGATCTTCAGCCAGTCGAGCGGCGCGGTGGCGCTGACGCTGACCGGGGTTGTCAGCGGCGCCGGCGCAGTGGTGCAGAACGGTCCCGGCCAACTCGTGCTGCAGAATGCGGGCAACGCTTATCTCGGCGGAACGGTCGTCAATGGCGGCGCGGTCGCTGTGGGTTCGGACGGCGCGCTTGGAAACGCCGCAGGCGGCCTCACCTTGAACAACAATGGCGGCTTCCTCGCGACGGCGAGCTTCGCGACGGCGCGCGCCATCACGCTGAACGGAACAGGTGGAATTGCCGTCGCCGGCGGCGAGACATTGACCGCCAATGGAGTGATCGGCGGCGCGGGCGCGCTCAATTTCAACGGAGCGGGAACGCTGACGCTCGGCGCGGCCAACACGTACGCCGGCGGAACCACGGTGACGGGCGGCGTGCTCAACGCGAACGCGGCGGGCTCGTTGTCGACCGGCGCTGTCGCGGTCAATGGCGGCTCTCTGAATAACAACGCCGCGAACTCTGTGGCGTCGGTCAGCATTGGCGCTGGCGGCGCGCTGACCAATTCCTCGGTATTGACGTCGGCTGCGCCGATTCAGAACGCCGGAACATTCACCACGACTGTCGGCTCCGTCACGAATGGCGGCTTGGTCAACAGCAATCAGGTGAACGCCGGCGGCGGTGCGATCAACGGCGCGATCACGAATATGGGCTCCGGCGTGTTTGCGGTGACCGGCGCCGTCGTTGCCGGATCGACGTTCGACAATATCGGCTCGGCGCAGCTCAATGTGAATGCTGGCGGAAGTCTGACCGGGGTGACCACGCTGACGAACAGCGCGGCCGTGAACGTCAGCGGCGCGCTGACGGCGAACACCGTCGTCAACAGCAGCGCGGTCAATGTGAACGCCGGCGGCGTTCTCACGGCGGCCGGCGGGCTGACCAACACGACCTCGGGCGTCGTGACGGTTGCTGCGGGCGGAACCGTGAATGACGACCTCAATAACGCCGGCCTGGTCGACAACAGCGGAATCTACAACGCGGTCGTCGCCTCCAACACCGGAACCATCAACAACAATGCGACCGGCGTCTGGACCGGCAACGTGGTGTCCAGCTCCGGCGTGATCAACAACGCTGGCGTCTGGAACGGTTCGCTCGTCAATTCGGGAACCTTCGCGCAGACGGCGGGCGTGCTGTCCAACGGGCTGACCAACACCGGAACCGTCAATGCGTCAGGCGGCGCGATCAACGGCGCGATCGCCAACAACGCGGGCGTGTTCAACGTCAACGGCTCCATCACGAACAACAACAACGTCTTCACGAACGCCGCGGGCGCGAGGCTCAATCTTGTGGCCGGAACCTTCAGCGGCCTGAACGCCCTGAACAATTCTGGCGCGGTGACGTTCGACGGCTCCCGTTCGCTGGGCGCGGCCAACATCGTCAACAACGGCGTGCTCGCGGCGACGGCGCCAGGGAACGTGCTGACGACGACCGGATCATTGACGGGCAATGGCGTGATCGCGGCGCAGATCGCTGGCGGAACCGTCAGCGTCGTCAACGCGACGGGGGGCGCTTCGGCCGGCTCGCAGACGATCACCTTC
PROTEIN sequence
Length: 1068
MQRSHFSRHDGGSSLKKGWLSSTSLPLAAIIAAMAISQPALANGGDVTNGSGGASGLGGVDSTTGAGGNGATGPDSSGSGGGAGVGAGGAGGAGGFFGGAGGAGGVHGVVVNGVDIGAASAGTDGGNGASGAPDGGGGGGAGGYGAVVSGTVGVNAAVTGGNGGSGGLGSAFRGGGGGSGGYGVFLNTGGVLTNNSTITGGNGGGGAYLGPGPSGAGVFGDAGGVSIINNGTIVGGAGANAITFAGGANALTLGAGTLTGNIGVNGGGSVNFNDAAGASTLANVITGNGSIEKTGAATLNLTGVNTYSGSTTISAGVLGANSTASLGDGSATNTLIFNGGSLQTLDNMAFAATRSVSVIGSGTIDTAGNTLSIAGVISGAGALTKSGAGILALSGNNAGFSGGITVAAGTLSLQNDNAAGTGAITTTGSVIDYANGVTIANPIVISSNTTQLQTLTGVTATQSGVISEDVAGRPLEKIGAGTLILSGANTYTGATTITDGALSVAADNNLGAGGPLVFNGGSLRTTASFTSARAVTANAPGAIFSQSSGAVALTLTGVVSGAGAVVQNGPGQLVLQNAGNAYLGGTVVNGGAVAVGSDGALGNAAGGLTLNNNGGFLATASFATARAITLNGTGGIAVAGGETLTANGVIGGAGALNFNGAGTLTLGAANTYAGGTTVTGGVLNANAAGSLSTGAVAVNGGSLNNNAANSVASVSIGAGGALTNSSVLTSAAPIQNAGTFTTTVGSVTNGGLVNSNQVNAGGGAINGAITNMGSGVFAVTGAVVAGSTFDNIGSAQLNVNAGGSLTGVTTLTNSAAVNVSGALTANTVVNSSAVNVNAGGVLTAAGGLTNTTSGVVTVAAGGTVNDDLNNAGLVDNSGIYNAVVASNTGTINNNATGVWTGNVVSSSGVINNAGVWNGSLVNSGTFAQTAGVLSNGLTNTGTVNASGGAINGAIANNAGVFNVNGSITNNNNVFTNAAGARLNLVAGTFSGLNALNNSGAVTFDGSRSLGAANIVNNGVLAATAPGNVLTTTGSLTGNGVIAAQIAGGTVSVVNATGGASAGSQTITF