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SCNpilot_cont_300_bf_scaffold_287_curated_17

Organism: scnpilot_dereplicated_Rhizobiales_4

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 15559..16152

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000362DDFC similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 196.0
  • Bit_score: 193
  • Evalue 2.00e-46
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 196.0
  • Bit_score: 192
  • Evalue 1.10e-46
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACS17684.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 196.0
  • Bit_score: 192
  • Evalue 4.80e-46

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGGAGACGCGCGACATCCCGACCCTCAACCGCCGCATCGCCGAGCGCGTCCGCAGCCGCCGGCTCGAGCGTGAGATGACGCTCGACGGCCTCGCCGCCGAAACCGGCGTCAGCCGCGCCATGATCTCCAAGATCGAGCGCGGCGAGGCGAACCCGACCGCGCCGGTCCTCGCCAAGCTCGCCAACGGGCTCGGGCTCAACTTCTCGGCGATGTTCGAGTCGGACGTGGCGACCGCGCCCCTCAGCCGCCGCGGCGAACAGGCCGTCTGGCGCGATCCCGAGACGGGCTATGTGCGCCGGAACGTGTCGCCGCGCGGCTTCGGCGCGCCGATGGAGCTGGTCGAGGTCGAGCTGCCGCCCGGCGCCCGCGTCCTGTTCGAGCAGGGCTATCCGACGCCGCTGGCGCGCTTCGTCTGGCTGCTGGAGGGTTCGCTTGTGGTTTCCGTGCAGGACGAGAGGCATGCGCTGACGGTTGGCGACTGCCTGCACATGCGCCTCGATGCGCCGCTCGCCTTCCACAATCCCGGCGCGTCGCCCGCGCGCTACGCGCTCGTGACGGAATCGGCGCCGCGCAAGGCGAGGGGCGGCGAATGA
PROTEIN sequence
Length: 198
METRDIPTLNRRIAERVRSRRLEREMTLDGLAAETGVSRAMISKIERGEANPTAPVLAKLANGLGLNFSAMFESDVATAPLSRRGEQAVWRDPETGYVRRNVSPRGFGAPMELVEVELPPGARVLFEQGYPTPLARFVWLLEGSLVVSVQDERHALTVGDCLHMRLDAPLAFHNPGASPARYALVTESAPRKARGGE*