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SCNpilot_cont_300_bf_scaffold_480_curated_13

Organism: scnpilot_dereplicated_Rhizobiales_4

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(14870..16309)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 471.0
  • Bit_score: 567
  • Evalue 1.30e-158
UDP-N-acetylmuramyl-tripeptide synthetase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 469.0
  • Bit_score: 561
  • Evalue 3.70e-157
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00035C7168 similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 475.0
  • Bit_score: 571
  • Evalue 8.60e-160

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
ATGAAGCTTGGCGCCCTCATCACGGACTGTCCGTCGCCATTCGACGACACGGACATCGTCGGCGTGACCGCCGACAGCCGCGCCGTGCAGCCCGGTTATCTGTTCGTCGCCGTTCCTGGCGTGAAAGCGAACGGCGCGCAGTTCATCCAGGACGCCGTCGCGCGCGGCGCAGCCGCCGTTGTGACTGAGGCGGACATGCAAGGCGCAGCCTCCGCCACAACGATCCGCGTGGCCGATGCGCGCGCCGCTCTCTCATCCATCGCCGCCCGCTTCCATCCCTTGCAGCCGGAGACGATCGTCGCCGTCACGGGCACCAGCGGCAAGACGTCGGTCGCCGAGTTCACGCGTCAGATCTTCGCCTCATGCGGACGCTCCTCCGCAAGCCTCGGCACGCTCGGCGTCATCAAGAGCGACGGCGCCGCCTATGGCTCGCTGACGACGCCAGACCCGGTCACGATCCATCGCACGCTTGATTCGCTCGCGCGCGAGGGCGTCACCCGCCTCGCGATGGAAGCGTCGTCGCACGGCCTCGATCAGAAGCGGCTCGACGGCGTGCGGTTGCGCGCCGCCGCGTTCACCAACCTTGGTCGCGATCACCTCGACTACCATCCCGACGTCGAATCTTATCTGGCGGCCAAGCTCCGTCTTTTCACCGACCTTCTTCCGGCCGACGGCGTCGCAGTGATCAATATGGACGGCGAGCGAAGCGCCGATGTCGTGAAGGCTGCGCAACGGCGCGAACTGAAGTTCGTCAGGGTCGGGCGTCGCGGCGCCGAGACTACGTTGGACAGCGTCGCGCGCGAAGGATTCGCCCAGCGGCTTGTCATTGCCAGCGGCGGCCGGAGCTGGCGGTTGCGGCTGCCCCTGATCGGCGAATTCCAGGGCGAGAACGCGCTCACCGCCGCGGGTCTCGCCATCGCCGCGGGCGAAGATCCGGACAATGTTTTCCCTGCGCTGCAGACGCTGCGCGGCGTTCCCGGACGGCTTGAGGTCGTCGGCGAAGCGCGCGGCGGCGTCGCGCTTGTCGATTATGCGCACAAGCCTGACGCGCTTGCCGCGGCGCTTGATGCGCTGCGCCCGTTCGCATCCGGCAGGCTGATCGTGGCGTTCGGCTGCGGCGGCGATCGCGACCGGGGCAAGCGGCCGTTGATGGGCGCCATTGCGGCGGACAAGGCGGATATCGTCATCGTGACCGACGACAATCCCCGCAGCGAAACGCCAGCCGCCATCCGGCGGCAAATTCTCGCGGCGGCTCCCGGCGCGCGCGAGATCGGCGACCGCGCCGAAGCGATCGGCGCGGCCGTCGGCATGATCGGCGCCGGCGACGTCGTCCTCATCGCGGGAAAGGGCCATGAAACCGGACAGATCATCGGCGATCGCACATTGCCGTTCTCTGATCGCGAGGCGGTCGCGGCCGCGTTGAGGGAGCTGGCTGCGTGA
PROTEIN sequence
Length: 480
MKLGALITDCPSPFDDTDIVGVTADSRAVQPGYLFVAVPGVKANGAQFIQDAVARGAAAVVTEADMQGAASATTIRVADARAALSSIAARFHPLQPETIVAVTGTSGKTSVAEFTRQIFASCGRSSASLGTLGVIKSDGAAYGSLTTPDPVTIHRTLDSLAREGVTRLAMEASSHGLDQKRLDGVRLRAAAFTNLGRDHLDYHPDVESYLAAKLRLFTDLLPADGVAVINMDGERSADVVKAAQRRELKFVRVGRRGAETTLDSVAREGFAQRLVIASGGRSWRLRLPLIGEFQGENALTAAGLAIAAGEDPDNVFPALQTLRGVPGRLEVVGEARGGVALVDYAHKPDALAAALDALRPFASGRLIVAFGCGGDRDRGKRPLMGAIAADKADIVIVTDDNPRSETPAAIRRQILAAAPGAREIGDRAEAIGAAVGMIGAGDVVLIAGKGHETGQIIGDRTLPFSDREAVAAALRELAA*