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SCNpilot_cont_300_bf_scaffold_480_curated_16

Organism: scnpilot_dereplicated_Rhizobiales_4

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(18466..19512)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 350.0
  • Bit_score: 429
  • Evalue 4.10e-117
mraW; S-adenosyl-methyltransferase MraW; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 339.0
  • Bit_score: 400
  • Evalue 6.00e-109
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVG0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 350.0
  • Bit_score: 429
  • Evalue 3.00e-117

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
ATGACGGGCCGCGGCGCGGGACCCTCCTCCCACGCTGCTGGTGGACCGGTTCGTCACGTTCCCGTGCTCCGGAAGGAGTCCATCGAAGCGCTCGCGCTTCACGCCGGCGGCGTCTATCTCGACGGCACATTCGGCGCGGGCGGCTATTCACGCGCGATCCTTGAAGCGGAACCCTCCTGCCGCGTCATCGCCGTCGATCGCGATCCGGACGCCATCCGCTCCGGCGCCGCGCTGGCCGATGAATTCAGCGGCCGCTTCGTTCTCGTGCAAGGGCGTTTCGGCGATCTCGACCGGATCGCGCAGACGCAAGGCGCTGCGACGCTCGACGGCGTCGCGCTCGATGTCGGCGTCTCCTCCATGCAGTTCGACGAAGCGCAGCGCGGGTTTTCCTTCCGCTTCGACGCGCCGCTCGACATGCGCATGGAGCAGTCGGGCCGCTCGGCCGCCGATATCCTTGCCGAGGCGAGCGAGGAGGAACTGGCCGACATCCTCTACCATTTCGGCGAGGAGCGCCGCGCGCGCGCCTTTGCGCGCGCCATCGTCGCACGCCGCAAAAGCGCGCCCGTCGCGACGACGCGGGAGCTTGTTGATCTGATCACCACCATCGAGCGGCCGCGACCCACCATGATTCATCCGGCGACGCGCACGTTTCAGGCGCTGCGCATCGCCGTGAACGACGAGCTCGGCGAACTCGTTCGCGCGCTGCACGCGGCCGAGCGCGCGCTCACGCCCGGCGGGCGGCTCGCCGTCGTAACCTTCCATTCGCTCGAAGACCGCATCGTGAAGCAGTTTTTCGCATCGCGCTCCGGGCGCGGCGAAGCCGCGTCGCGGCGGCTGCCGGGCGAACCCGAGGCGGACGCGCCGACCTTCTCGCTCGTGACGCGCAAGCCGATCGAGCCCGGCGCGGCCGAAATCGAGTCAAACCCAAGAGCGCGATCGGCGCGCCTGCGCGCCGCGGCGCGCACGGCGGCGCCCGCGCGCGCGCCGGATCCGGCGATCGACATGCTTGCGCGCTTGCCGCAGCCATCCGTGGGGAGGCGCGCGTGA
PROTEIN sequence
Length: 349
MTGRGAGPSSHAAGGPVRHVPVLRKESIEALALHAGGVYLDGTFGAGGYSRAILEAEPSCRVIAVDRDPDAIRSGAALADEFSGRFVLVQGRFGDLDRIAQTQGAATLDGVALDVGVSSMQFDEAQRGFSFRFDAPLDMRMEQSGRSAADILAEASEEELADILYHFGEERRARAFARAIVARRKSAPVATTRELVDLITTIERPRPTMIHPATRTFQALRIAVNDELGELVRALHAAERALTPGGRLAVVTFHSLEDRIVKQFFASRSGRGEAASRRLPGEPEADAPTFSLVTRKPIEPGAAEIESNPRARSARLRAAARTAAPARAPDPAIDMLARLPQPSVGRRA*