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SCNpilot_cont_300_bf_scaffold_480_curated_27

Organism: scnpilot_dereplicated_Rhizobiales_4

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 28788..30029

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Rhizobium loti RepID=UPI0003744CDA similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 415.0
  • Bit_score: 390
  • Evalue 1.80e-105
Secretion protein HlyD family protein {ECO:0000313|EMBL:CDX46401.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 400.0
  • Bit_score: 389
  • Evalue 4.30e-105
multidrug resistance efflux pump similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 387.0
  • Bit_score: 386
  • Evalue 1.10e-104

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Taxonomy

Mesorhizobium sp. ORS3359 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1242
ATGCCTGAACCCGCCGCGAACGACGATCCCGGCGCGACCCGCCCGCCTGCCGTCGATGCGACGACGCATGCGGGCGGCGCCAAGATTCACGAGCTTCCCAGCGCGAAGGCGCCGGCTCCGACTGCGGAGCGTCCGCCGCGCGTCGCCCCGGCGGGAGAAGCGCCCGCCCTCGCCGCCGCGCCGCCCGCGCGCCGGTCGCGCCTGCGCGGCGTCCTGCTTCTGCTGGGCCCCGTCGTCGTCATCGCGGCGGCGCTTGGATTCTACCTGCTCGGCGGCCGCTACGTCTCGACCGACAACGCCTATGTGCGCGCCGACAAACTGAACATCGCCACGCAGATTTCTGGCGCCGTGAGCGACATTCCCGTCCACGAAAACCAGGGCGTCAAAAAGGGCGACGTGATCTTTCGCATCGACGATGCGCCCTATCGCATCGCTCTGGCCGCCGCCGAGGCGCAGCTTGGCGCGACGCGCAACGAGATCATGACGCTGCAGGCGACCTATCGCCAGAACATCGCGCAGATCGAGCAGGCGAAGATCGACGTCGCCTTCTATGAGACCGCTTTCCAGCGCCAGCAGGATCTGATCAAGCGCGGCGTGTCGAGCCAGACTTTGTTTGATCAGGCCAAGCATGATCTGGACGCCGCGCGCGAGCGTGTAACCGTGGCCCAGCGCTCAGCGGAAACCGTTCTCGCCCAGCTCGGCGGCGACGCGGCGAGCGATGTCGGCGGCAATCCGCGCGTGCGGAACGCTCAGGCGCAGGTTGACGGCGCGCGCCGCAACCTGTCGCTCGCCACGATCGTCGCGCCGATCAACGGCATTGCGGCGAACGTGTCCTCGCTGCAGATCGGACAATATCTCGCCGCCGGCCAGCCGGCCTTCTCCATCGTCGGCTCCGACGATGTCTGGGTGGACGCCAACCCGAAGGAAACGGATCTCGCCGGCGTGAAGCCGGGCGCGAAGGCGCATGTTACGATCGACGCCTATCCCGGCCGCGAATGGAGCGCATCCGTCGCCAGCATCAGTCCGGCGACGGGCGCGGAGTTCTCCGTGCTGCCGGCCCAGAACTCGTCGGGCAACTGGATCAAGATCGTCCAGCGCGTGCCGGTGCGGCTGCATGTCGATCATGTGGAGGGCGCGCCGCAATTGCGCTCGGGCATGAGCGCGAATGTCGAGATCGAAACCGGGGAGCGGCGCTCGCTTGGCGGCCTGTTCGCCGCGCTTCGCCATCTTCTCGGACTCTGA
PROTEIN sequence
Length: 414
MPEPAANDDPGATRPPAVDATTHAGGAKIHELPSAKAPAPTAERPPRVAPAGEAPALAAAPPARRSRLRGVLLLLGPVVVIAAALGFYLLGGRYVSTDNAYVRADKLNIATQISGAVSDIPVHENQGVKKGDVIFRIDDAPYRIALAAAEAQLGATRNEIMTLQATYRQNIAQIEQAKIDVAFYETAFQRQQDLIKRGVSSQTLFDQAKHDLDAARERVTVAQRSAETVLAQLGGDAASDVGGNPRVRNAQAQVDGARRNLSLATIVAPINGIAANVSSLQIGQYLAAGQPAFSIVGSDDVWVDANPKETDLAGVKPGAKAHVTIDAYPGREWSASVASISPATGAEFSVLPAQNSSGNWIKIVQRVPVRLHVDHVEGAPQLRSGMSANVEIETGERRSLGGLFAALRHLLGL*