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SCNpilot_cont_300_bf_scaffold_708_curated_4

Organism: scnpilot_dereplicated_Rhizobiales_4

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 4185..6209

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Methylosinus sp. LW4 RepID=UPI000360690C similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 679.0
  • Bit_score: 1005
  • Evalue 2.50e-290
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 679.0
  • Bit_score: 1002
  • Evalue 3.90e-289
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 678.0
  • Bit_score: 999
  • Evalue 4.40e-289

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Taxonomy

bacterium YEK0313 → Bacteria

Sequences

DNA sequence
Length: 2025
ATGGCGACTAAACCGATCGAGAAAAAGGACGGCGAGGCGGCTACGGAAAGCGGCGACAGCCCCCTGCTCGATATGAACGACGCCGCTGTGAAGCGGATGATCAAGCTCGCCAAGAAGCGCGGCTACATCACCATCGACCAGATCAACGAGGTGATGCCGGCCACCTCCTTCACCTCGGACCAGATCGAGGACATGAGCGCCATGTTGAACGACATGGGCATCAATGTCGTCGACAATGACGATCAGGAGACCGAGGGCGAGGCCGCCCGCGAGGAGGGCGAGGAGGACGAGCCGGAGGGCGGGGAGGTCACCGAGACCGCGCGCACCGCGGTCGTCAAGGTCGAGAAGACGTCCGAGCCCGTCGACCGCACCGACGATCCGGTGCGCATGTATCTGCGCGAGATGGGGGCGGTGGAACTGCTCTCCCGCGAGGGCGAAATCGCCATCGCCAAGCGCATCGAGGCCGGCCGCGAGGCGATGATCGCGGGGCTGTGCGAAAGCCCGCTGACCTTCCAGGCCATCATCATCTGGCGCGACGAACTGAACGCCGGCAAGGTGCTGCTGCGCGACATCATCGACCTCGAGGCGACCTACGCCGGCCCCGACGCCAAGAACGCGCCGCCGCCCCAGCCGCCGGTCGGCGCGAGCGCCGCGCCTCCGGTCCGCCCCGCCGCGCCCGCCGCCAACGACGAGTTCGCCGACGGCGAGAGCGAGCAGCCGGCCGAGGCCGAGCCGGACGAAGACGACGAGAACAACGTCTCGCTCTCCGCGATGGAGGCGGAGCTGAAGCCGCGCGTGCTCGAAACGTTCGACCGCATCGCCGGCGAATACAAGAAGCTGCGCCGCCTGCAGGACCAGAAGGTCGAGGGCAAGCTGACCGCGAGCGTGGCGCTGACGCCTTCGCAGGAGCGCAAGCACAAGAAGCTGAAGGACGACATCATTGCCGACGTGAAGTCGCTGTCGCTCAACCAGAACCGCATCGACGCGCTGGTGGAGCAGCTCTACGACATCAACAAGAAGCTGATGGGCCACGAGGTGCGCCTGATGCGCCTCGCCGAAAGCTATGGCGTGATGCGCGAGGGCTTCCTCAAGGAGTGGCAGGGCTCCGAGATGGACCCGAAATGGCTCGTGCGCGTCTCCAAGCTCACGGCCAAGGGCTGGCGCGAATTCATCGCGCGCGAGAAGGATCGCGTGCATGAGATCCGCGACCATTTCCACACGCTCGCGCAGGAGACCGGCCTCGAGATCGGCGAATTCCGCAAGATCGTCCTGATGGTGCAGAAGGGCGAGCGCGAGATGCGCCAGGCGAAGAAGGAGATGATCGAGGCGAACCTGCGCCTCGTGATCTCGATCGCCAAGAAATACACCAATCGCGGCCTGCAGTTCCTCGACCTCATCCAGGAAGGCAATATCGGCCTGATGAAGGCGGTCGACAAATTCGAATATCGCCGCGGCTACAAATTCTCGACCTACGCGACCTGGTGGATCAGGCAGGCGATCACGCGCTCGATCGCGGATCAGGCCAGGACCATCCGCATCCCGGTGCACATGATCGAGACGATCAACAAGATCGTCCGCACCTCGCGCCAGATGCTGCATGAGAGCGGCCGCGAGCCGACGCCGGAGGAACTGGCGGAAAAACTCGCCATGCCGTTGGAAAAGGTGCGCAAGGTGCTGAAGATCGCCAAGGAGCCGATCTCGCTCGAAACGCCGATCGGCGACGAAGAGGATTCGCATCTCGGCGATTTCATCGAGGACAAGAACGCGCTCCTGCCGATCGACGCCGCCATCCAGGCGAATCTGCGTGAGACGACGACGCGCGTGCTGGCCTCGCTGACGCCGCGCGAGGAGCGCGTGCTGCGCATGCGCTTCGGCATCGGCATGAACACCGACCACACGCTCGAAGAGGTGGGCCAGCAGTTCTCGGTGACCCGCGAGCGCATCCGCCAGATCGAGGCGAAGGCGCTCAGGAAACTGAAGCATCCGAGCAGGTCGCGGAAGCTGCGTTCGTTCCTCGACAACTGA
PROTEIN sequence
Length: 675
MATKPIEKKDGEAATESGDSPLLDMNDAAVKRMIKLAKKRGYITIDQINEVMPATSFTSDQIEDMSAMLNDMGINVVDNDDQETEGEAAREEGEEDEPEGGEVTETARTAVVKVEKTSEPVDRTDDPVRMYLREMGAVELLSREGEIAIAKRIEAGREAMIAGLCESPLTFQAIIIWRDELNAGKVLLRDIIDLEATYAGPDAKNAPPPQPPVGASAAPPVRPAAPAANDEFADGESEQPAEAEPDEDDENNVSLSAMEAELKPRVLETFDRIAGEYKKLRRLQDQKVEGKLTASVALTPSQERKHKKLKDDIIADVKSLSLNQNRIDALVEQLYDINKKLMGHEVRLMRLAESYGVMREGFLKEWQGSEMDPKWLVRVSKLTAKGWREFIAREKDRVHEIRDHFHTLAQETGLEIGEFRKIVLMVQKGEREMRQAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHESGREPTPEELAEKLAMPLEKVRKVLKIAKEPISLETPIGDEEDSHLGDFIEDKNALLPIDAAIQANLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDN*