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SCNpilot_cont_300_bf_scaffold_426_curated_22

Organism: scnpilot_dereplicated_Rhizobiales_4

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(23564..24892)

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion outer membrane protein, TolC family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YL93_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 450.0
  • Bit_score: 505
  • Evalue 4.10e-140
Type I secretion outer membrane protein, TolC family {ECO:0000313|EMBL:EIM24735.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 450.0
  • Bit_score: 505
  • Evalue 5.80e-140
TolC family type I secretion outer membrane protein; K12340 outer membrane channel protein similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 435.0
  • Bit_score: 474
  • Evalue 3.20e-131

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1329
ATGGTTGCTCTGCAGTCGCCGGCGGCTGCGGAAACGCTCGAAGGCGCGCTCGGCCGCGCTTATGGCAATAACCCCACGCTGAACGCGCAGCGCGCGTCGCTTCGCGCGACGGACGAGAGCGTGTCGCAGGCGTTGTCGGGCTACCGGCCGCGAATATCGGGCTCGGCCGATGTCGGCGCTCAGCAGGACAGGACGACCCTTCCCGGCGGGACGTCGACCCAGAACTATCTGCCGCGCGGCGTCTCGCTCTCCATCAGCCAGACCATCTGGAACGGAAACCGTACGCAGAACAGCGTGTCGCAGGCGGAATCGCAGGTGTTCGCTGCGCGCGAAACGCTGCGCAACTCCGAGAATCAGGTGCTGCTCGACGGCGTGACGGCCTATATGAACGTCATGCGCGACACGGCCATTCTTGGCGTCAGGCGCAGCAACGTCGAGGTTCTCGAGGAGCAGCTTCGGCAGGTTCGCGATCGGTTCAATGTCGGCGAGGTGACCCGCACCGACGTCGCGCAGACCGAAGCCCAACTCGCCAGCGGCCGTTCCGACGCGGCCGGCGCAGAGGCCAACCTGCGCGCTTCGCTCGCCACTTACCGACAGCGGATCGGCGTCGACGCCAAGCGGCTCGCGCCCGCGCGTCCTCTCGACCGATTCGTCCCGAAATCGCTCGACGCCGGAGTCGCGTCCGCGTTGCGGGAGCATCCCGCCATCAACGCCGCGATGCATGGCGTCGATGTCGCGCAGCTCAATGTGAAAGTGATCGAGGGCGAGCTTTATCCGTCGTTGACCGCGACCGGCTCGATCTCGCGGCGGTGGGATTTGCAAGGGTCCGACGTCGAGCGCAGCTCCGCTGCGATCGTCGGGACGCTGTCGATTCCCATCTATGAGGGCGGTCAGGTCTATTCGCGCGTCCGCCAGGCGAAGGAGCAGCTCGGCCAGCAGCGCATCAGCGTCGATATCGTGCGCGATCAGGTGCGCCAGGCGGTGATGGCGTCATGGGCCACGGTCGAGGCGACGAAGCTGCAGGTCTCGGCCGCGCAGGCGCAGGTCCAGGCGGCGGAAGTGGCGCTCGCCGGCGTGCGCGAGGAGGCGAAGGTCGGTCAGCGCACGACGCTCGACGTGCTCAACGCGCAGCAGACCGTGGCCAATGGCCGCGTCGCGCTGGTGTCGGCGCAGCGCGATCGCGTCGTCGCGACCTATGCGCTGCTATCGGCGCTCGGCCGTCTGTCAGCGCAGACGCTTGCGCTGAAGGTCGAGCGCTACAATCCGCGCACTCACTATGACATGGTGCGGGACAAGTTCATCGGACTTGATACGCCCGGCGGCCGTTAA
PROTEIN sequence
Length: 443
MVALQSPAAAETLEGALGRAYGNNPTLNAQRASLRATDESVSQALSGYRPRISGSADVGAQQDRTTLPGGTSTQNYLPRGVSLSISQTIWNGNRTQNSVSQAESQVFAARETLRNSENQVLLDGVTAYMNVMRDTAILGVRRSNVEVLEEQLRQVRDRFNVGEVTRTDVAQTEAQLASGRSDAAGAEANLRASLATYRQRIGVDAKRLAPARPLDRFVPKSLDAGVASALREHPAINAAMHGVDVAQLNVKVIEGELYPSLTATGSISRRWDLQGSDVERSSAAIVGTLSIPIYEGGQVYSRVRQAKEQLGQQRISVDIVRDQVRQAVMASWATVEATKLQVSAAQAQVQAAEVALAGVREEAKVGQRTTLDVLNAQQTVANGRVALVSAQRDRVVATYALLSALGRLSAQTLALKVERYNPRTHYDMVRDKFIGLDTPGGR*