ggKbase home page

SCNpilot_cont_300_bf_scaffold_2566_curated_18

Organism: scnpilot_dereplicated_Rhizobiales_4

near complete RP 52 / 55 BSCG 51 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(14673..15542)

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase (EC:1.1.1.100) similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 279.0
  • Bit_score: 300
  • Evalue 4.10e-79
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D32A0 similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 290.0
  • Bit_score: 431
  • Evalue 4.90e-118
Putative oxidoreductase {ECO:0000313|EMBL:GAD50764.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 278.0
  • Bit_score: 311
  • Evalue 1.40e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGGCGGATGAGCTTTCCATTCTCGGACTGGCGGGCAAGACGGCGCTCGTCACCGGCGGCGGCGCCGGGATCGGCCGCGCGACGGCGGAATTGTTCGGCCGCGCCGGCATGCGCGTCGCCGTCGCCGAGATCGATGCGGCGCGCGCCGCCGACGCGCGCGCCGCGCTCGTGGCGGCGAACGTCGATTCCCTTGTCGTCGAAGCCGACGTGCGGCGCGCCGACGAGGTGGCGCGGCTTTTCGGCGAAGTCGATGGGCGCTTCGGCCGGCTCGACGTTCTGGTCAATAATGTCGGCGATTATCTCGGCTACAAGAAGCCGTTCGAGGAGTCGAACGAGACGGAGTGGAACGAACTCTACGCCGTCAATCTGCTGCATATGTTTCATGTGACCAAGGCGGCCATTCCGCTGCTGCGCCGGGGCGGCGGCGGCGCGATCGTCAATCTGTCCACCATCGAGGCGTTTCGCGGCATTCCGCACACCGTCGCCTACGCGGCGTTCAAGGCGGCGATCACCGGCTTCACGCAGAGCCTCGCGGTCGAACTTGGAGCCGACAATATCCGCGTCAACGCGGTTGCTCCCGAGACCACCAACTCCGCGCAGATCGTGGCGACGCCGCGCGTGCCGCCGGAGAATCGCGACTACGTCAAGCGCTGGTTTCCGATCGGCCGCTTCGGCGAAGGCGCCGATTCCGCCGGCGCGGCGCTGTTTCTCGCGTCGGACAGTCTCTCCGGCTGGGTGACGGGCTCGACCATTCTGGTCGATGGCGGCGCGCTCGCCGCCGGCGCCTGGATGCGCCTGCCGGACGGGCGTAACTTCACCCATCTGCCGATCATCGTCGCCGACGGCTACACGCCGAGACCGGGCGCCTGA
PROTEIN sequence
Length: 290
MADELSILGLAGKTALVTGGGAGIGRATAELFGRAGMRVAVAEIDAARAADARAALVAANVDSLVVEADVRRADEVARLFGEVDGRFGRLDVLVNNVGDYLGYKKPFEESNETEWNELYAVNLLHMFHVTKAAIPLLRRGGGGAIVNLSTIEAFRGIPHTVAYAAFKAAITGFTQSLAVELGADNIRVNAVAPETTNSAQIVATPRVPPENRDYVKRWFPIGRFGEGADSAGAALFLASDSLSGWVTGSTILVDGGALAAGAWMRLPDGRNFTHLPIIVADGYTPRPGA*