ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4278_curated_4

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 2946..4145

Top 3 Functional Annotations

Value Algorithm Source
putative periplasmic binding ABC transporter protein n=1 Tax=Oceanicola sp. S124 RepID=UPI0002557D2B similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 398.0
  • Bit_score: 522
  • Evalue 5.00e-145
putative substrate-binding component of ABC transporter; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 398.0
  • Bit_score: 361
  • Evalue 2.70e-97
Putative substrate-binding component of ABC transporter {ECO:0000313|EMBL:ACP26795.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 398.0
  • Bit_score: 361
  • Evalue 1.20e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGAAGAAATTCCTGCTGGCGACGACCGTTCTCGCGTCGCTCGCTTTCGTCGCGTCGGCCCAGGCCGGCGACGGCAAGATCAAGATTGGCGTCCTGAACGACCAGTCGTCTTCCTTCTCCGCGCTCGGCGGCACCGAGGTGGTGAAGGCGGTCGAGCTGGCGATCAAGGATTTCGGCGGCCAGGTCCTCGGCCAGCCGATCGAGCTGGTCTCGGCCGACCACCAGAACAAGGCCGACGTGGCGCTGGGTATCGCGCGCCAGTGGCTCGACAAGGACAATGTCGACGTGATCGCCGACGTGGCCAACTCGGCGGTCTCGCTGGGCATCAACACCCTCATCGGCGAGAAGAAGTCGATCGGCCTGTTCGTGTCGCCGCTGAGCGACAAGTCGACGGAAGCCGACTGCAACGGCCGCGTGGTGGCCTGGGCCTACGACGTCAACTCGATGGTCAGCACCACCGTGCAGGCCCTGCTCGACCAGGGCAACAAGTCGTTCTTCATCATGTCGAACGACTACGAGGCCGGCAAGGCCCAGGAAGCCTGGGTCGAAGGGGCCGTGAACGCCGCCGGCGGCGAGATCAAGGGCAAGGTCCGCGTTCCGCTCAACACCACCGACTTCTCGTCCTACATGCTGCAGGCGCAGGCGTCGGGCGCGGAGGCGATCGTGCTGAACGTCGGTGGCACCGACCTCGTCAACGCGATGAAGCAGGCGCAGGAGTTCGGCATCATCGGCTCCGGCCAGAAGGTCGCCATCACCTTCCTGCACCAGTCGGACGCGCGCGCCATTGGTATCGACGCGCTCAAGGGCGCCCGCTTCTCCGCGCCGTGGTTCTGGAACATGGACGAGGCCTCGCACAAGTTCGGCCTGCGGATGAAGGAGCTCACCGGCAACGGTCCGGGCTGGATCGCGGCCGGCAACTATTCGGCCGTCACCAACTACCTCAAGGCGGTCGAGAAGGCCGGCAGCGACGATCCGGACGCGATCCTGAAGGCGCTGCACGAGATGAAGATCGAGGATTTCTTCGTCCACAACGGCACGATGTATCCGAACGGCCGGCTGATCCACGACATGTATCTCGTCGAGGTGAAGAACCCGGACGAGGTCAAGGAAGGCGACGACTTCTTCAAGCTGGTCGCCAGCGTGCCGGCCGAAAAGGCGTTCAAGCCTTACGCGGACTCGGCCTGCAAGATCGGCAAGTAG
PROTEIN sequence
Length: 400
MKKFLLATTVLASLAFVASAQAGDGKIKIGVLNDQSSSFSALGGTEVVKAVELAIKDFGGQVLGQPIELVSADHQNKADVALGIARQWLDKDNVDVIADVANSAVSLGINTLIGEKKSIGLFVSPLSDKSTEADCNGRVVAWAYDVNSMVSTTVQALLDQGNKSFFIMSNDYEAGKAQEAWVEGAVNAAGGEIKGKVRVPLNTTDFSSYMLQAQASGAEAIVLNVGGTDLVNAMKQAQEFGIIGSGQKVAITFLHQSDARAIGIDALKGARFSAPWFWNMDEASHKFGLRMKELTGNGPGWIAAGNYSAVTNYLKAVEKAGSDDPDAILKALHEMKIEDFFVHNGTMYPNGRLIHDMYLVEVKNPDEVKEGDDFFKLVASVPAEKAFKPYADSACKIGK*