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SCNpilot_expt_1000_bf_scaffold_4278_curated_13

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 12793..14745

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide biosynthesis protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003493109 similarity UNIREF
DB: UNIREF100
  • Identity: 35.0
  • Coverage: 649.0
  • Bit_score: 309
  • Evalue 8.30e-81
Uncharacterized protein {ECO:0000313|EMBL:EXL09488.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.7
  • Coverage: 636.0
  • Bit_score: 448
  • Evalue 1.20e-122
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 650.0
  • Bit_score: 308
  • Evalue 5.80e-81

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Taxonomy

Aquamicrobium defluvii → Aquamicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1953
ATGGTCACAGCCGAAGAAACGGCTCGCACGCCCGCGCCGCCGACGGCCGGCGCCAGCGTCGACGTGCTCGGCCTGATCGACATGGTCTGGCGCCGCAAATGGCTGATCCTGGCCACCGCGGCGGCCGTGGTGGCGCTGGCGCTCGCCGCGCTCGCCGTGATCGGCCCCCGCTACAAGGCGACGGCGCGCATCCTGATCGACCCGCGCGAGGTGCGCGTGGTGCAGAACGACGTGGTGCAGCAGGGCCTCGGCAACGACCTGCTGCTGATCGAGAGCCAGGTCGAGGTGATCACCTCCGAGACCGTGCTGATGCGCGTGGTGCGGCAGGAAAAGCTCGCCGAGGACGCCGAGTTCGTGAAGCCGGCGGATGGCGGGAAGGCCGCCGCGCGCTCGCCCGAGGAGGTCGCGCTCGAAAGCCTCGCCAAGGCGACCAAGGTGTCGCGCGCGGAAAACACCTACGTCATCGAGATCGCGGTGACGACGAAGGAGCCGGCCAAGTCAGCGCGGCTCGCCAATGCGATCGCGGCCGCCTACACCGACGACCAGCAGGACGCCACCGCGAAGGCGACCCGCACCGTCAGCAACTCGATCGAGGATCGGCTGGCCGAGCTGCAGAAGAAGCTGCGCGAGGACGAGCAGAAGGTCGAGGACTACAAGACCGCCAACAATCTCTCCAGCCCGGACGGCAAGCCGCTGCTGGACAACCGCCTCTCCGACCTGTCGACGCGGCTCGCCGCCGCCGTCGGCCGCACCGCCGAGGCCAAGTCGCGGCTGGAAGTGATCGAGCAGGCGATGAAGCAGCGCGGCGACGTCAGCTCGGTGGTCTCCGACACCGAGAACACGACGATGGTGCAGCTTCGCAACCAGTTGAGCGAGGCGCAGCGCAAGCATGCCGAGCTGAGCCAGACGCTCGGGCCGCGCCATCCGCGCGTCGCGGCCGCGCAGGCCGAGGTCGATCAGGCGCGCGCAGCCATTCGCGGCGAGAGCGAGCGCCTCGTCGCGGCCACGCGCGACGCCTGGCGCGCCGCCAAGGAGACCGAGGACGCCATCGCCGCCAGCCTGCGGGACCTGACCGGCCAGTCCTTCGACATCAACCAGAAACTGATCCAGCTCCGCGAGCTGGAGCGGCAGGCGCAGGCGAGCCGTCTCGTCTACGAGGCCTTCCTGGTGCGCGCCAAGGAGGCTGCCGAGCAGGAGAACCTCGGCACCCGCAACGCCCGTATCATCGCGCCGGCCGCCGTGCCCGACAGCGCCGCCTTCCCGCCGCGCAGCCTGCTGCTGATCGCGGCCTGCGTGTTCGGCCTCGGTCTCGGCCTGTTCAACGCCATCGTCGCCGACCTCATCGCGCGCCACCGGCGCCCCGCCGCGCCGAAGCCGGGCAAGCCGGCAGCGCCGGCGGCGGAAGCGCGGCCGCGCACGCCGCTCGGCGACCCGGCGCAGATCCTGCGCGACCATGTCGTGCTGACGCTCAGCCTGGCCGACGCCGAAGGCGCGCGGACGGCAGGACTGGAGCTTGCCCGCGACGCCGCGCGCGAGGGTCATCCGACCCTGTTCGTCGACCTCGCCGACGGCAGCGGCCGGCCCGGCTTCGCGGAGCTGTCGACGGGCAAGGCGGCGATCGGCGACATACTGACGCGCGACGACGCCTCGGGCGCGCACATCGTGCATGGCGGCGACGCCGAGGGGATGGCGGAGGCGGAGTTCCGCGAGGCCTTCTCGATCTTCCTCGACACCTACGAGCGGGTGGTGGTCAATGCCGGCCTGCTGTCGCAGGCGGCGGGCGCGATGGCGGCCGAGGCAGTCGCCAAGGCCGACCATGCCGTGCTGGTGGTGCCGGGCGACACGCTGTCGGCCGAAGAGGCGGCCGCCTACAAGGAACTCGCCGCCTCGGGCGGCATGGCGGTCTCCGTGCTGTCGCTCGCCGACGAGCCGCAGCAGCGCGCCGCCGCCTGA
PROTEIN sequence
Length: 651
MVTAEETARTPAPPTAGASVDVLGLIDMVWRRKWLILATAAAVVALALAALAVIGPRYKATARILIDPREVRVVQNDVVQQGLGNDLLLIESQVEVITSETVLMRVVRQEKLAEDAEFVKPADGGKAAARSPEEVALESLAKATKVSRAENTYVIEIAVTTKEPAKSARLANAIAAAYTDDQQDATAKATRTVSNSIEDRLAELQKKLREDEQKVEDYKTANNLSSPDGKPLLDNRLSDLSTRLAAAVGRTAEAKSRLEVIEQAMKQRGDVSSVVSDTENTTMVQLRNQLSEAQRKHAELSQTLGPRHPRVAAAQAEVDQARAAIRGESERLVAATRDAWRAAKETEDAIAASLRDLTGQSFDINQKLIQLRELERQAQASRLVYEAFLVRAKEAAEQENLGTRNARIIAPAAVPDSAAFPPRSLLLIAACVFGLGLGLFNAIVADLIARHRRPAAPKPGKPAAPAAEARPRTPLGDPAQILRDHVVLTLSLADAEGARTAGLELARDAAREGHPTLFVDLADGSGRPGFAELSTGKAAIGDILTRDDASGAHIVHGGDAEGMAEAEFREAFSIFLDTYERVVVNAGLLSQAAGAMAAEAVAKADHAVLVVPGDTLSAEEAAAYKELAASGGMAVSVLSLADEPQQRAAA*