ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2126_curated_18

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: comp(18081..18551)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A4106 similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 143.0
  • Bit_score: 118
  • Evalue 8.60e-24
weak similarity to Azospirillum brasilense CarR protein (CAA49825) involved in regulation of carbohydrate catabolism similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 110.0
  • Bit_score: 89
  • Evalue 1.00e-15
Tax=RBG_16_Armatimonadetes_67_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 152.0
  • Bit_score: 175
  • Evalue 4.90e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Armatimonadetes_67_12_curated → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 471
ATGCCCTCCTGCACGATCAGGCGTGAGCCGGCGCAGCAGACCTGGCCCTGGTTGAACCAGATACCGTCGACGAGGCCCTCGACCGCCGAATCGAGGTCGGCGTCCTCGAACACGACGAAGGGTGATTTTCCCCCGAGCTCCAGCGACAGCTTCCGGCCGGTGCCGGCGGTCGCCTTGCGGATAATCTTGCCGACCTCGGAGGAGCCGGTGAAGGCGATCTTGTCGATGCCTTCGTGCTCCACGATCGCCGTCCCGGCTTCCGGCCCGCCATGGACGATGTTGACCACGCCCTTCGGCACGCCGGCCCGCTCGCACACCTGCGCGAACAGGATCGCCGTCAACGGCGTGAACTCGGCCGGCTTGAGCACCACCGTGCAGCCGGCGGCGAGCGCCGGCGCGATCTTCCAGGCCAGCATCAGCAGCGGGAAATTCCACGGGATGATCTGGCCGGCTACTCCGACGCCCCTGTAA
PROTEIN sequence
Length: 157
MPSCTIRREPAQQTWPWLNQIPSTRPSTAESRSASSNTTKGDFPPSSSDSFRPVPAVALRIILPTSEEPVKAILSMPSCSTIAVPASGPPWTMLTTPFGTPARSHTCANRIAVNGVNSAGLSTTVQPAASAGAIFQASISSGKFHGMIWPATPTPL*