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SCNpilot_expt_1000_bf_scaffold_6817_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: comp(4170..4883)

Top 3 Functional Annotations

Value Algorithm Source
glucose-methanol-choline oxidoreductase; K00108 choline dehydrogenase [EC:1.1.99.1] similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 216.0
  • Bit_score: 240
  • Evalue 4.20e-61
UPI0003D1C80E related cluster n=1 Tax=unknown RepID=UPI0003D1C80E similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 211.0
  • Bit_score: 279
  • Evalue 4.40e-72
Contig28, whole genome shotgun sequence {ECO:0000313|EMBL:ETA50623.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 211.0
  • Bit_score: 279
  • Evalue 6.20e-72

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Taxonomy

Rhodobacteraceae bacterium PD-2 → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGCTGAGCGCGGAGGTGGCGTGGTGGCGCGCCGCAATGTCGCTGGGTCGCTACGCATTGCTGCGCAGCGGACCCGCGGCCCACCACGGCATCCAGGTGCTCGGCTTCGCCGATTCACGGCCGGGCCTGGCCGCTCCCGACATCCAATACCATCTGCTGCTGCTGATGTACGACAATCACGGCCGCAGCATCGACGGCGCCGACGGCTTCATGCCTTATTTCAACCTGTCGCGGCCGCAAAGCCGCGGCCGCGTCTTCATACGCTCGGCCGATCCAACTGCCGCTCCCGCCATCCAACCGAACTATCTGCAGGAAGGCGAGGACGTCCGTGTCATCCACGAGGGCCTGAAGATCGCGCGAGACATCATCGCCCGGCGGGCGCTTGACACCTATCGTTCCCACGAATTCGCGCCCGGCGCGGACATCGCCAGCGACGCCGAAATCGACGGTTATATCCGGCGCACTGCCGAGTCGGTCTATCACCCGGTTGGCACCTGCAAAATGGGCTCCGATCTCCTCAGTGTCGTCGACGACCGCCTGCGGGTCCGAGGCATCGATCGCCTGCGCGTCATCGATGCCTCAATCATGCCCACCATCAGCAGCGGCAACACCAACGCCCCCACCATCATGATCGCCGAACGCGGGGCATCATTCGTGATGGAACAGCATGATACCGTCGAAGCGGCGGGCACAAGATTCGTGGCTCGTGCTTGA
PROTEIN sequence
Length: 238
MLSAEVAWWRAAMSLGRYALLRSGPAAHHGIQVLGFADSRPGLAAPDIQYHLLLLMYDNHGRSIDGADGFMPYFNLSRPQSRGRVFIRSADPTAAPAIQPNYLQEGEDVRVIHEGLKIARDIIARRALDTYRSHEFAPGADIASDAEIDGYIRRTAESVYHPVGTCKMGSDLLSVVDDRLRVRGIDRLRVIDASIMPTISSGNTNAPTIMIAERGASFVMEQHDTVEAAGTRFVARA*