ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5054_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 273..812

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF5FFE related cluster n=1 Tax=unknown RepID=UPI0003CF5FFE similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 179.0
  • Bit_score: 292
  • Evalue 2.90e-76
Site-specific recombinase, DNA invertase Pin {ECO:0000313|EMBL:ETA72682.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 179.0
  • Bit_score: 292
  • Evalue 3.10e-76
resolvase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 179.0
  • Bit_score: 279
  • Evalue 6.10e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGGCACGCATCGGCTACGCCCGCGTCAGCACGACCGACCAGGACCTCGACCAGCAGCTCGCCAAGCTGCACGCCGAGGGCTGCGAGATCGTCCGCTCGGAGAAGGTGTCAGGCGCCAGCCGCGACGGCCGCGCCGAGCTGGCCACGGTCCTCGACTTCCTGCGCCCCGGCGACGAGCTGGTGGTCACCCGCCTTGACCGGCTCGGCCGCGACATGCGTGACGTCCTCAACCTGATCCACGAGTGCGAACAGAAGGGCGCTTTCGTCACCGTGCTCGACCCGCATGTGTCGACCCGCGGCGAGATGGGGCATCTGGTGCTGACGGTGCTAGGCATGGTGGCGCAGATGGAGCGGCGGTTCATCAAGGAGCGGCAGCGCGAGGGGATCGAGCGGGCGAAGTCCAATGGAGCCTATCGCGGCGGCAAGCCGCGTCTCGACCACGACAGGATCCACCAGTTCCACGACGAAGGCGCCTCACCCTCCGCCATCGCCAAGGCGGTCGGCTGCTCGTGCATGCAGGTGTATTGGATACTCAAATGA
PROTEIN sequence
Length: 180
MARIGYARVSTTDQDLDQQLAKLHAEGCEIVRSEKVSGASRDGRAELATVLDFLRPGDELVVTRLDRLGRDMRDVLNLIHECEQKGAFVTVLDPHVSTRGEMGHLVLTVLGMVAQMERRFIKERQREGIERAKSNGAYRGGKPRLDHDRIHQFHDEGASPSAIAKAVGCSCMQVYWILK*