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SCNpilot_expt_1000_bf_scaffold_1017_curated_24

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: comp(25547..26389)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 281.0
  • Bit_score: 419
  • Evalue 3.50e-114
aroE; shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 281.0
  • Bit_score: 413
  • Evalue 5.50e-113
Shikimate dehydrogenase n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BB90_RHILV similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 281.0
  • Bit_score: 419
  • Evalue 2.50e-114

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 843
ATGAGCGGGCCTCGCGCGTTCATCCTCGGACACCCCGTGTCCCACTCGCGCTCGCCGATGCTGCACGGCTACTGGCTGAAGCGCTACGGCATCGACGGCAGCTACGAGCGGGCCGACGTGGCGCCGGCCGACCTGCCGACCTTCTTCGCCGGCTTTCGCGACAACTGGGTCGGCGGCAACGTCACCGTCCCGCACAAGCTCGCCGTCATGCCCTATCTCGACCGCATCGACGATGCGGCAGGCCGGATCGGCGCGGTCAACACGCTGTGGCTGGAAGACGGCAGGGTCGTCGGCGGCAACAGCGACTGGATCGGCTTCATCGGCAACCTGGACGAGCTGGCGCCCGGCTGGGACGGCGGTTCGGGCCGGGCGGTGATCCTCGGCGCCGGCGGGGCGACGCGCGCAGCCGTCTACGGGCTCCTCAAGCGCGGGATGGAGATCGCGCTGTGCAACCGCACCGTGGCGAAGGCGCAGGAGCTGGCCGACCATTTCGGCAAGGGCGTCACCGCGCACAGCCTCGACGAGCTTCCCGGGTTGATGAAGTCGGCGCGCCTGCTGGTCAACACGACGAGCCTCGGCATGGTCGGGCAGCCGCCGCTGGAGATCGACCTGTCGCGGCTCCCGGCGGATGCGATCGTCCACGACGTCGTCTACGTGCCGCTGGAGACGAACCTGCTCAAGGCCGCCAAGGCGCGCGGGCTGAGGACGGTCGACGGGCTGGGCATGCTGCTGCACCAGGCGGGCGAGGGGTTCCGCCACTGGTTCGGCCGCACGCCCGAGGTGACGGCGGAGCTGCGCAAGCTGCTCGCCGACGACATACGGGCCAAGACGCCGGGGGCGTGA
PROTEIN sequence
Length: 281
MSGPRAFILGHPVSHSRSPMLHGYWLKRYGIDGSYERADVAPADLPTFFAGFRDNWVGGNVTVPHKLAVMPYLDRIDDAAGRIGAVNTLWLEDGRVVGGNSDWIGFIGNLDELAPGWDGGSGRAVILGAGGATRAAVYGLLKRGMEIALCNRTVAKAQELADHFGKGVTAHSLDELPGLMKSARLLVNTTSLGMVGQPPLEIDLSRLPADAIVHDVVYVPLETNLLKAAKARGLRTVDGLGMLLHQAGEGFRHWFGRTPEVTAELRKLLADDIRAKTPGA*