ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4612_curated_16

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: comp(14329..14988)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7P2_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 219.0
  • Bit_score: 374
  • Evalue 9.30e-101
Response regulator {ECO:0000313|EMBL:AID31584.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 219.0
  • Bit_score: 378
  • Evalue 9.00e-102
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 219.0
  • Bit_score: 374
  • Evalue 2.90e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium huakuii → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGCGCACGCTGTTGGTCGAGGACGATGCTGTGCTGGGTGCGGCGGTGCGCGACCAGCTTTCCAGTGACGGGCATTCGGTCGACTGGGTGACGCGCCTCGACGCGGCTCGCGACGCAATGGCCGGCGCGGCGCACGATCTCGTCCTTCTCGACCTCATGCTGCCGGACGGTCGCGGCATCGTCTTCCTGAGATCTTTGCGTAGCGCGGGCAACGTCACCCCCGTCATCATCCTGACGGCCCTCGACCAGGTCTCCGATCGGATCGAAGGGCTGAAGGCCGGAGCCGACGACTACCTCGTCAAGCCATTCGATCTGGACGAGCTTTCCGCGCGGATCGGTTCGGTCGCGCGCCGCTATTCTGGCAATCCCAACCCGATCATCCACATCGGTCCGCTGGAAATCGATATCGCACGCCGAAGCATCCGGCGCGAGGGAACGGCGGTGCAGCTGACGGCGCGCGAATGGGCCCTGCTGGACGCATTCCTTACCCGCCCCGGTCAGCTGCTTTCGAAATCCCAACTGGAGGAGAAGCTCTACGATTTCGATTCCGAGATCGAGAGCAACACGATCGAGGTTCATGTGAGCCGCCTGCGCAAGAAGCTTGGACCGAATCTCATCGAGACCGAGCGCGGCCTCGGCTATCGGCTGGCCAGGGCATGA
PROTEIN sequence
Length: 220
MRTLLVEDDAVLGAAVRDQLSSDGHSVDWVTRLDAARDAMAGAAHDLVLLDLMLPDGRGIVFLRSLRSAGNVTPVIILTALDQVSDRIEGLKAGADDYLVKPFDLDELSARIGSVARRYSGNPNPIIHIGPLEIDIARRSIRREGTAVQLTAREWALLDAFLTRPGQLLSKSQLEEKLYDFDSEIESNTIEVHVSRLRKKLGPNLIETERGLGYRLARA*