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SCNpilot_expt_1000_bf_scaffold_5425_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: comp(1487..2122)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=3 Tax=Ochrobactrum RepID=C4WN40_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 210.0
  • Bit_score: 285
  • Evalue 3.20e-74
TetR family transcriptional regulator {ECO:0000313|EMBL:EXL03035.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 210.0
  • Bit_score: 304
  • Evalue 1.60e-79
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 206.0
  • Bit_score: 282
  • Evalue 1.10e-73

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Taxonomy

Aquamicrobium defluvii → Aquamicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGGAAACCGGCACATTGAGCGCCCGCGAGAAGGTGCTCCAGCGGAGGCAGCAGGTACATGCCGCGATCCGCGAGGCGGCGATCGAGGAATTCTCGGCCAAGGGTCTCGCTGGAGCTTCGACGCAATCCATCGCCCAGCGTGCGGGGCTGACCAAGCCACAGCTCCATTACTACATCTCCAGCAAGGAGGAGCTCTACGAGGATGTGCTGGTCGGCATCCTCGAGGAGTGGAAGGAGATCTTCATGAGCGCCTCTGCCGGCGAGAGCCCTGCGGAGGTGATCTGCGCCTATATCGAGAAGAAGCTCGAATACGGGCAGAAGAACCCGAAGGCCTCGCGGCTATTCGGTGCCGAGATCGCCAGCGGCGCACCCTATCTGCGGCGCTATTGGGACGAATACCACGCCTCGACCCGCGAGACGGGCGACCTCATCCGGTCATGGATCGACAAGGGTCTGATCCGTCCGGTCGATCCGCTGCTGTTTCAGATCCACATCTGGGCCGTGACGCAGCATTATGCCGACTTCGACCTGCAGGTTCGCAACGTGATGCAGATCGGCGCCGATCAGGAGGTCGACCTGGACCACATCAAGAAGGAAGTCTGCTCGCTGTTCCTGCGCGCCTGCGGCCTCGAATGA
PROTEIN sequence
Length: 212
METGTLSAREKVLQRRQQVHAAIREAAIEEFSAKGLAGASTQSIAQRAGLTKPQLHYYISSKEELYEDVLVGILEEWKEIFMSASAGESPAEVICAYIEKKLEYGQKNPKASRLFGAEIASGAPYLRRYWDEYHASTRETGDLIRSWIDKGLIRPVDPLLFQIHIWAVTQHYADFDLQVRNVMQIGADQEVDLDHIKKEVCSLFLRACGLE*