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SCNpilot_expt_1000_bf_scaffold_2618_curated_8

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: comp(4417..5115)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003710FF7 similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 231.0
  • Bit_score: 251
  • Evalue 9.60e-64
RNA polymerase sigma 70 {ECO:0000313|EMBL:KJC47145.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 230.0
  • Bit_score: 260
  • Evalue 1.70e-66
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 232.0
  • Bit_score: 249
  • Evalue 8.80e-64

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Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
GTGGCGCGCCTGTGCCTGGACATGCTGCGCGCCCGCAAGGCGCGCCGCGAGGACTCTTTCGAGGCCATGCAGGAAGACGGGCCGCTCGCATCCATGGCCGACGCGGGCGCCGATCCCGAGGACGAGATCGCGATGGCCGACTCGGTCGGCCTCGCCATGCTGACGGTGCTGGAGACGCTGGCGCCGGCCGAGCGCGTCGCCTTCGTGCTGCACGACATGTTCGCCGTGCCGTTCGAGGAAATCGCGCCGGCCATCGGGCGCTCGCAGGATGCCGCGCGCCAGCTCGCCAGCCGCGCACGCCGCCGCGTTCAGGGCGCGCGTCCGGATGGGCATGTGGACGCCGGGCGCCGGCGCGAGATCGTCGACGCCTTCCTCGCCGCCTCGCGCGGCGGCGACCTGACGGCACTGCTCGCGCTGCTCGACCCCGACGTCGTGCTGCGCGGCGACGCCGCCACGCTGNNNNNNNNNNNNNNGCCCGAGATCCGCGGCGCGGGGCCGGTGGCGGAATTCTTCAACGGCAGGGCGCAGGCGGCGAGGCCGGCCCTCGTCGACGGCACGATAGACGTTGCCGTCGTTCCCGGCGGCCGGCTGTTGCTGGTGCTGCGGCTGGAGATCGCCGGCGGGCGGATCGCTGCCATCAATGCCGTCGCCGACCGCGCCGACCTCGGTCGGCTCGACGTGGCGCTTCTCGACAGCTGA
PROTEIN sequence
Length: 233
VARLCLDMLRARKARREDSFEAMQEDGPLASMADAGADPEDEIAMADSVGLAMLTVLETLAPAERVAFVLHDMFAVPFEEIAPAIGRSQDAARQLASRARRRVQGARPDGHVDAGRRREIVDAFLAASRGGDLTALLALLDPDVVLRGDAATLXXXXXPEIRGAGPVAEFFNGRAQAARPALVDGTIDVAVVPGGRLLLVLRLEIAGGRIAAINAVADRADLGRLDVALLDS*