ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4590_curated_11

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 11413..11784

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1C1_DESTA similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 105.0
  • Bit_score: 122
  • Evalue 3.60e-25
putative nucleic acid-binding protein, contains PIN domain similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 105.0
  • Bit_score: 122
  • Evalue 1.10e-25
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 105.0
  • Bit_score: 164
  • Evalue 8.80e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
GTGATCCTCGTCGACGCGAACCTGCTGCTTTATGCCTATCATCCCAAGGCCGAGCAGCACGAGAAGAGCCGCAGATGGCTCGAGGCGGTGCTGTCCGGCACGGACGTCGTAGGGTTCGCCTGGCTGACCCTTTGGGCTTTCATCAGGATCTCCACCAATCCGCGGGTCTTCGAAAATCCGCTGTCCGCATCCGAGGCGGCGGACGCGGTGTCGTCATGGCTCGACCAGCCGGTCTCGACGATCCTCCAGCCGGGCGAGCGCCATTGGGACATCCTGCGCGCCGTCGCGCGCGATGGTCAGGCGGTCGGTCCCCTGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTAG
PROTEIN sequence
Length: 124
VILVDANLLLYAYHPKAEQHEKSRRWLEAVLSGTDVVGFAWLTLWAFIRISTNPRVFENPLSASEAADAVSSWLDQPVSTILQPGERHWDILRAVARDGQAVGPLFXXXXXXXXXXXXXXXXL*