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SCNpilot_expt_1000_bf_scaffold_2914_curated_11

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: comp(9226..9567)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal silencing factor RsfS n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98EZ9_RHILO similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 113.0
  • Bit_score: 198
  • Evalue 3.60e-48
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 111.0
  • Bit_score: 200
  • Evalue 1.30e-48
hypothetical protein; K09710 ribosome-associated protein similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 113.0
  • Bit_score: 198
  • Evalue 1.10e-48

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
GTGAACCAGGTCCTGAACACGGCCCTTGCCAGTCTCGACGACTCCAAGGCCGAAAACATCGTCTCCATCGACATCCAGGGCAAGTCCAGCCTCGCCGATCACATGGTGATCGCGTCGGGCCGCTCCCACCGCCATGTCGCCGCCGTCGCCGACAACGTCCTCAAGGCGTTGAAGGAAGCGGGCTTCGGCAATGCGCGGGTCGAGGGCCTGTCTGGCGCCGACTGGGTGCTCATCGACGCCGGCGACGTGATCGTGCATGTCTTCCGGCCCGAGGTCCGCGAATTCTACAATCTCGAGAAGATGTGGCAGGCGCCGGACCTGGAGGAAGAAACGATCCACTGA
PROTEIN sequence
Length: 114
VNQVLNTALASLDDSKAENIVSIDIQGKSSLADHMVIASGRSHRHVAAVADNVLKALKEAGFGNARVEGLSGADWVLIDAGDVIVHVFRPEVREFYNLEKMWQAPDLEEETIH*