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SCNpilot_expt_1000_bf_scaffold_1848_curated_9

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 7658..8263

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 201.0
  • Bit_score: 377
  • Evalue 1.10e-101
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 201.0
  • Bit_score: 375
  • Evalue 1.20e-101
  • rbh
3-isopropylmalate dehydratase small subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HL11_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 201.0
  • Bit_score: 377
  • Evalue 7.70e-102

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGGAAAAGTTCACCACGCTCACCGGCGTCGCCGCGCCCCTGCCGATCGTCAACATCGACACCGACATGATCATCCCCAAGGATTATCTGAAGACGATCAAGCGCACCGGCCTCGGCACCGGCCTCTTCGCCGAGATGCGCTTCAACGAGGACAGCACGGAAAACCCAGACTTCGTTCTCAACAAGCCGGCCTACCGCAAGGCGCAGATCCTGGTGGCGGGCGACAATTTCGGCTGCGGCTCCTCGCGCGAGCACGCGCCCTGGGCGCTGCTCGACTTCGGCATCCGCTGCGTGATCTCGACCAGCTTCGCCGACATCTTCTACAACAACTGCTTCAAGAACGGCATCCTGCCGATCACCGTCAGTCCCGAGGACCTGGAGAAGCTGCTGGACGACGCCTCGCGCGGCGCCAACGCGACGCTGACCGTCGACCTCGAGGCCAACGAGATCCGCGGCCCGGACGGCGGCGTGGTCAGGTTCGACCTCGACGCCTTCAAGCGGCACTGCCTGCTCAACGGGCTCGACGACATCGGCCTGACCATGGAGAAGGCCCCCTCGATCGAGGGCTTCGAGAAGGGCTACGCCGAGACCCGGCCCTGGGCCTGA
PROTEIN sequence
Length: 202
MEKFTTLTGVAAPLPIVNIDTDMIIPKDYLKTIKRTGLGTGLFAEMRFNEDSTENPDFVLNKPAYRKAQILVAGDNFGCGSSREHAPWALLDFGIRCVISTSFADIFYNNCFKNGILPITVSPEDLEKLLDDASRGANATLTVDLEANEIRGPDGGVVRFDLDAFKRHCLLNGLDDIGLTMEKAPSIEGFEKGYAETRPWA*