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SCNpilot_expt_1000_bf_scaffold_6373_curated_14

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 16521..16721

Top 3 Functional Annotations

Value Algorithm Source
Inner membrane component of binding-protein-dependent transport system n=2 Tax=Bordetella bronchiseptica RepID=K4QP32_BORBO similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 65.0
  • Bit_score: 90
  • Evalue 6.20e-16
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 65.0
  • Bit_score: 90
  • Evalue 2.00e-16
Inner membrane component of binding-protein-dependent transport system {ECO:0000313|EMBL:CCN25282.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 65.0
  • Bit_score: 90
  • Evalue 8.80e-16

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Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 201
ATGCTCTCGGGCGCGGTGTTGACCGAAACGGTGTTCGGCTGGCCCGGGCTCGGCGTGCTGACGGTGCAGGCCGTGGCGCAGCGCGACTACCCGCTGCTTCTCGGCATGTTCCTGCTGACGTCGGTGATGGTGATCATCGCCAATGTGGTGACCGACCTGGTCTACCTGGCCATCAATCCGAGGCTTCGCGGCAATGGCTAG
PROTEIN sequence
Length: 67
MLSGAVLTETVFGWPGLGVLTVQAVAQRDYPLLLGMFLLTSVMVIIANVVTDLVYLAINPRLRGNG*