ggKbase home page

SCNpilot_cont_300_bf_scaffold_44_curated_10

Organism: scnpilot_dereplicated_Rhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(6498..7559)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 332.0
  • Bit_score: 674
  • Evalue 9.80e-191
Pseudouridine synthase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LMG9_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 332.0
  • Bit_score: 674
  • Evalue 7.00e-191
ribosomal large subunit pseudouridine synthase C similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 332.0
  • Bit_score: 674
  • Evalue 2.20e-191

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
ATGATCCCGCCAAACGAGGTTTGGCATTTGTGGGGACATGCCGCGGTGTTTGAAAGAAGAAGAATGGCCGGGATTGAACATATACAGGTCGAGCCTGATGAAGCGGGCATGCGTCTCGACCGCTGGTTCAAGGTGCATTTCCCGGGGCTCGGCTTCGGCCAGCTGCAGAAGCTGCTGCGTTCGGGTCAGGTGCGCGTCGATGGTGGCCGCGTCAAGACGGATGCGCGCGTGCAGCCGGGACAGATCGTGCGCGTGCCGCCTCTCGATGTCGATGCGAAGGCTCTGAAGAGTGGTCCGATCGCCGGCAACGACCTCAAGCACGGCGGCGACGCCGAGCTTCTGTCGCGAATGCTGCTTCATGAAGACGACAAGGTCTATGTGCTGAACAAGCCGGCTGGCCTTGCCGTGCAGGGCGGTTCCGGCCTTACCCGTCATATCGACAAGATGCTTGAGGCATGGACAAGCAAGAAGGGTGAAAAGCCGCGCCTGGTGCATCGTCTCGACCGGGACACCTCCGGCGTACTCGTGGTCGCGCGCACCCGTGGTGCCGCACAGAAGCTGACGGCGGCGTTTCGCGAACGCGACACCAAGAAGACCTATTGGTCGCTGGTCAAGGGCGTGCCGCGCAAGCATGAGGATAAGATCTCCACCTGGCTGGTGAAGGAAGCGACGGCCGATGGCGACCGCATGCGTATCGCCAAGCACGGTGAGGAGGGCGCGGACCACGCAATCTCCTATTACCGCGTGCTCGAAACCGCTGCTCAAAGCCTCGCCTGGCTGGAGATGGAGCCCTATACCGGCCGCACGCATCAGCTGCGCGTCCATGCGCTGCACATGGGCCATCCGATCATCGGCGATCCCAAATATTTCGATGACGATCCTAACTGGGATTTTCCCGGTGGAGTCCAAAAGCGCCTGCATCTCCACGCGCGCCATATCGATATTCCGCATCCGACGGGTGGCCGCCTGCGCGTCACCGCGCCGCTGCCGCCGCATATGGTGCAGACTTGGAACCTTCTCGGCTTTGATATGGAATCGGCAGGGGAGCCGGACGACGAATGA
PROTEIN sequence
Length: 354
MIPPNEVWHLWGHAAVFERRRMAGIEHIQVEPDEAGMRLDRWFKVHFPGLGFGQLQKLLRSGQVRVDGGRVKTDARVQPGQIVRVPPLDVDAKALKSGPIAGNDLKHGGDAELLSRMLLHEDDKVYVLNKPAGLAVQGGSGLTRHIDKMLEAWTSKKGEKPRLVHRLDRDTSGVLVVARTRGAAQKLTAAFRERDTKKTYWSLVKGVPRKHEDKISTWLVKEATADGDRMRIAKHGEEGADHAISYYRVLETAAQSLAWLEMEPYTGRTHQLRVHALHMGHPIIGDPKYFDDDPNWDFPGGVQKRLHLHARHIDIPHPTGGRLRVTAPLPPHMVQTWNLLGFDMESAGEPDDE*