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SCNpilot_cont_300_bf_scaffold_157_curated_27

Organism: scnpilot_dereplicated_Rhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 13501..14511

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 336.0
  • Bit_score: 657
  • Evalue 1.20e-185
DNA-directed RNA polymerase subunit alpha n=3 Tax=Rhizobium RepID=L0LJK7_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 336.0
  • Bit_score: 657
  • Evalue 8.40e-186
rpoA; DNA-directed RNA polymerase, alpha subunit similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 336.0
  • Bit_score: 657
  • Evalue 2.60e-186

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGATTCAGAAAAACTGGCAGGAACTGATCAAGCCCAACAAGGTCGAGTTCACCTCGAGCGGCCGCACCAAGGCAACGCTCGTGGCTGAACCGCTGGAGCGTGGCTTTGGTCTTACCCTCGGCAACGCGCTGCGTCGCGTTCTGCTGTCCTCTCTGCGTGGCGCCGCTGTGACGGCCGTGCAGATCGACGGCGTATTGCATGAGTTCTCCTCTATCCCGGGCGTCCGGGAAGACGTGACGGACATCGTGCTGAACATCAAGGAAATCGCCATCAAGATGGACGGCGATGACAGCAAGCGCATGGTCGTCCGCAAGCAGGGCCCAGGCGTTGTAACGGCTGGCGACATCCAGACGGTCGGCGATATCGAAATCCTCAACCCCGAGCATGTCATCTGCACGCTCGACGAGGGTGCCGAAATCCGTATGGAGTTCACCGTCAACAACGGCAAGGGCTATGTCCCGGCCGAGCGTAATCGTGCGGAAGATGCACCGATCGGCCTTATCCCGGTCGACAGCCTCTATTCGCCGGTCAAGAAGGTGTCCTACAAGGTTGAAAATACCCGTGAAGGACAGGTTCTCGACTACGACAAGCTGAGCATGTCGATCGAAACCGATGGTTCGATCAGCGGTGAAGATGCCGTCGCTTTCGCGGCTCGCATCCTCCAGGATCAGCTTGGCGTGTTCGTCAACTTCGACGAGCCGCAGAAGGAAGCCGAAGAAGAAGCAGTTACCGAACTCGCTTTCAACCCGGCGCTCCTCAAGAAGGTGGACGAACTCGAACTGTCCGTTCGTTCGGCAAACTGCCTGAAGAACGACAACATCGTCTACATCGGCGACCTCATTCAGAAGACCGAAGCAGAAATGCTCCGCACGCCGAATTTTGGTCGCAAGTCGCTGAACGAAATCAAGGAAGTTCTCGCTTCCATGGGCCTGCACCTCGGCATGGAAGTGCCGGCATGGCCGCCTGAGAACATCGAAGATCTCGCCAAGCGTTACGAAGACCAATACTAA
PROTEIN sequence
Length: 337
MIQKNWQELIKPNKVEFTSSGRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDSKRMVVRKQGPGVVTAGDIQTVGDIEILNPEHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKVSYKVENTREGQVLDYDKLSMSIETDGSISGEDAVAFAARILQDQLGVFVNFDEPQKEAEEEAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY*