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SCNpilot_expt_1000_bf_scaffold_4714_curated_10

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 4715..5776

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 353.0
  • Bit_score: 423
  • Evalue 3.90e-115
phage DNA polymerase III, subunit beta (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 353.0
  • Bit_score: 420
  • Evalue 5.70e-115
DNA polymerase III subunit beta n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HBD0_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 353.0
  • Bit_score: 423
  • Evalue 2.80e-115

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
ATGCAGCTTTCCATAAAGCGCGCAGACCTTGCGCGCGCCGTTACGGCTGTCGGCAGAGCAGTCGAGGCGCGAAACACCGTTCCGGTATTGTCCATGCTACGCCTGTCCGCGGACAGCGATCGTCTGACATTGCGAGGCACCGATCTGGATGTCGAAGTTACCGCTTCGGCCACCGCGTCGGTTCACGCCGCCGGGGAGACTTGCGTCAACGCCAAGCTTTTGGCGGACATCGCGAAGAAGGCAGGCAACGACGACGTCAGCTTGACGCTTGAGGGTGACCAGTTGGTAGTCAAGTCAGGCAGGTCGCGGTTTTCACTTGCGACGTTGCCGGCATCGGATTTTCCAGACCTGACGGCCGGCACATACAACGCCGCCTTTGACATTGATCTCGCGGCGATGTTCGCGCCGGTCCAATTTGCGATTTCTACTGAAGAGACGCGCTATTTCTTAAATGGCATTTTCTTCAAGGGAGAATTCGACAAGACCATCGCCGTGGCGACCGACGGTCATCGTCTCTCGCGGCATCATGTAGCTGCCAGTGCCGAATTCGCGGGCATTATCGTACCTCGAAAGATTGTCAGCCTTTTGCCGAAAGGATCGGTGAAAGTCTCCGTGTCTGAGAGCAAGATCCGTGTCGAAGCAGGTGACTTGGTTATTGTCAGCAAGCTGATCGACGGGACGTTCCCCGATTACAATCGCGTCATTCCGACGGCCAACGACAAGATCATCACCGTCGACCGCGACGAGATCATGAAGGCGGCAGACCGCGTCTCCACGATTTCATCGGAGCGTGGCCGGGCTGTGCGTTTCAGCATCGCGCCGGGCGCTATCAGCTTGTCTGTCAACAACCCTGAATCGGGGAGCGCCAGCGACGAGATCCCAGCGGAATACAGCGGCGAGCCTTTCGAGATTGGCTTCAACAGCCAGTACATCCGCGATCTTTTCTCAGTCTTGCCGGCCGGACCTGTGCGGTTGGCGCTTCTCGATGGCGGCGCACCTGGCGTTATCACGTCGGCAGGTTTCGATGGTTGGACCGGCGTTCTGATGCCCATGAGGGTGTAG
PROTEIN sequence
Length: 354
MQLSIKRADLARAVTAVGRAVEARNTVPVLSMLRLSADSDRLTLRGTDLDVEVTASATASVHAAGETCVNAKLLADIAKKAGNDDVSLTLEGDQLVVKSGRSRFSLATLPASDFPDLTAGTYNAAFDIDLAAMFAPVQFAISTEETRYFLNGIFFKGEFDKTIAVATDGHRLSRHHVAASAEFAGIIVPRKIVSLLPKGSVKVSVSESKIRVEAGDLVIVSKLIDGTFPDYNRVIPTANDKIITVDRDEIMKAADRVSTISSERGRAVRFSIAPGAISLSVNNPESGSASDEIPAEYSGEPFEIGFNSQYIRDLFSVLPAGPVRLALLDGGAPGVITSAGFDGWTGVLMPMRV*