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SCNpilot_expt_1000_bf_scaffold_3630_curated_1

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(3..875)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036065E1 similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 291.0
  • Bit_score: 260
  • Evalue 1.50e-66
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EHS49624.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 281.0
  • Bit_score: 233
  • Evalue 2.80e-58
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 292.0
  • Bit_score: 171
  • Evalue 5.00e-40

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGAAAAAAGGCAGAACAACAATCCCCCTGAAAGGGTTTCAAGCCTTAGATGCGGTTGCCCGCCACCTCTCGGTCACAGAAGCTGCGACGGAACTGGGTGTCACCCAGAGCGCCGTCAGTCACCAGTTGCGCAAACTGGAAGAACATCTTGGAACTCAACTCCTCGATCGGCGGGGGCGAATTATCGGCCTGACTGAGACCGGCAGAAAGCTGGCGCGTTCACTCAATGATGCATTCGATCTCATGGAACAGTCGTCGACTGCTGCCATCGGCGGCAGCCATGCTGTTGTTCGGGTCGGCATCTACTCCTCTTTTGCCACGGGCTGGTTTATGCCAGCACTCGCACTGTTCTGTGATGCCCATCCGAATATCGATATACGCTTGGTTATGCTCTACGATCCGCACGAAATATCCGGTCGAATTGCCGACGTGTTCATAACATCTGAACCGGCCGCACCAGGATATTGGACGACAAGGCTTTTTCCAGAGACGCTTGTTCCGGTCATCAGCAAGAATAGTCCCCCGGTCACCTACGACACCGGCCTCCCTCTGATCACAGCAGAAATCCAGCCGGCGCTGGCCGGCCGGGACTGGGAGGCTTTTGCCGTTCTCAACAAAATAGACATGGCGACGTTGCGACTAGGGCGATGGGTTTGCTGCACGCATTATATCTTTTCTCTCGAAATGGTGCGGGCCGGAATGGGGGCAGCCCTGCTTCCGAATTTCATGGCCCACGCACTCCTTGCCACCGGGGAACTGCAACGATTGCCCGGAAAGCCCGTTCCGACAGGCCAGTCCTATGAAGCTCAAGTGAAGTATGAGCGCAGGAATGAACCGGATATCGTGCGTTTTATATCCTGGCTGAGAACCACG
PROTEIN sequence
Length: 291
MKKGRTTIPLKGFQALDAVARHLSVTEAATELGVTQSAVSHQLRKLEEHLGTQLLDRRGRIIGLTETGRKLARSLNDAFDLMEQSSTAAIGGSHAVVRVGIYSSFATGWFMPALALFCDAHPNIDIRLVMLYDPHEISGRIADVFITSEPAAPGYWTTRLFPETLVPVISKNSPPVTYDTGLPLITAEIQPALAGRDWEAFAVLNKIDMATLRLGRWVCCTHYIFSLEMVRAGMGAALLPNFMAHALLATGELQRLPGKPVPTGQSYEAQVKYERRNEPDIVRFISWLRTT