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SCNpilot_expt_1000_bf_scaffold_3070_curated_14

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 12059..12226

Top 3 Functional Annotations

Value Algorithm Source
leuD; isopropylmalate isomerase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 56.0
  • Bit_score: 108
  • Evalue 7.60e-22
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 55.0
  • Bit_score: 108
  • Evalue 3.40e-21
3-isopropylmalate dehydratase small subunit n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=LEUD_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 56.0
  • Bit_score: 108
  • Evalue 2.40e-21

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 168
ATGGATAAGTTTACAAAGCTCACCGGCGTCGCTGCGCCGCTCCCGGTCGTCAACATCGACACCGACATGATCATTCCGAAGGATTACCTGAAGACGATCAAGCGGACTGGTCTTGGCACCGGCCTTTTCGCCGAAGCCCGCTACAAGGAAGACGGCAGCCTGAACGAA
PROTEIN sequence
Length: 56
MDKFTKLTGVAAPLPVVNIDTDMIIPKDYLKTIKRTGLGTGLFAEARYKEDGSLNE