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SCNpilot_expt_1000_bf_scaffold_5562_curated_6

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 4267..6192

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI00038001D8 similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 641.0
  • Bit_score: 880
  • Evalue 1.20e-252
Outer membrane protein {ECO:0000313|EMBL:EHJ96951.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 641.0
  • Bit_score: 879
  • Evalue 2.10e-252
hypothetical protein; K07278 outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 641.0
  • Bit_score: 878
  • Evalue 1.80e-252

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1926
ATGTCGAAAACCCTGTGTAAGCCGAAAGAGAGTATTGCGTATCGGAGAGCCGGCACCGTCGTCACGGTTGCAGCAAGCGCCCTGCTGTGCCCGGTCTTCGCAACGGAAGCCCATGCCTTCAAGCTGTTCGGCATCACGCTCTGGGGCGAAGAAGAGCAGGCGGTCGACGTCATCGACCCGGTCAGATATTCCGTCACCTTGAATGCCGGCGCGGCCGACGACGCGCTGAAGACCGCGCTGGAAAACGCCTCCCACCTCGTCCAGGACAAGGACAAGCCGGTTTCCGGCGAACTTGGCCTGGTCATAAAGGCACGCGACGACCGCGACCGCCTGATCGCCACGCTCTACGAAAAATCCCGTTACGGCGGCGTTGTCACCGTCCTCGTCGATGGCACCGACATCGACCAGTTGCCGCCGACGCCGGTCTTCGACCAGTCGCGGCCGATACCGGTGACGGTGGAGATCAAGCCCGGCCCGGCCTTTAAGCTCGGCGACATCCGTTTCGAAGGCGATGCGCTCGGCCGTAACCCTGCCGATTACGGCCTGGTTGCGGGCGGTGACGCCAGTTCGCTGACCATTCTCAAGGCGGGCGACCGTATCGTCGAGGATTTGAAGAACGAGGGGCGCCCGCTCGCCAGGCTCGACAATCGCAGCGTCGTTGCCGATCATGAAACGAGCGAGGTCGATGTCGTGCTGACGGCAAGCGGCGGTCCCGTGGCACCGGTCGGCAATGTCGGCGTCAAAGGCCAGAAGAGCGTCGATCCGGAATTCATCCGCACCTATTCGCGCATCAACGAGGGCCGGCCCTACAATCCGGAAAACCTGAAGAAGGCCGGCGAGCGGCTGCGCCAGCTCGGCGTCTTTTCCAGCGTCACGGTGCGCGAGGGCGACGCGCTGGCGCCCGACGGCACGATCCCGGTCAATATCACCGTTGCCGAAGGCAAGCACCGCTACTTCGGGGCCGGGGCGCAATATTCCACCATCGACGGTTTCGGCCTGCAGGGATATTGGGGCCATCGCAACCTGTTCGGCCGGGCGGAATCGCTGCGTCTCGAAGCGGCCGTCTCGCGCATCGGCGAGGCCTCCGATTACCAGAAGATGGATTATTCCGCCGGCATCATCTTCAGCAAGCCGGGCTTCATCCTGCCGTCGGCGACGCTCAATGCCAGCATCAAGGCGAAGACGGAGCATCCCGATTCCTATCTCGCCAACACCGTGACGGCGGCGACCGGCATCTCTTACGAGCTTTCCGACCAGGACACGGCTTCCGCCGGCGTCGAGCTCAGCTATTCCGACACCGAGGACGCCTTCGGCGACAACGAATACCTGACCTTCTCGCTGCCGCTCGAATATGCGCGCGACGCCCGCGACAACAAGCTCGACCCGACAGAAGGTTATCGCGCCACGCTGGCGGCAAAGCCCAGCTACGAAATCTTCGGCAACACGTTCTTCTCCTCCTTCGAAGGATCGGTATCCGGCTACCAATCGCTGGGCGCCGGCGACCGCATCGTCTTCGCCGGCAAGGCGTCGCTCGGCACGCTGGTGGGCGCCGGCAACCTCGAGGACATACCGGCGACGCGGCGTTTCTATGCCGGCGGCGGCGGTTCGGTCCGCGGTTATGCGTATCAGGAGATCAGCCCCTACGACGCCAAGGGCGATGCGACGGGCGGCCGCTCCTACGCCGTCGTCTCCGCCGAGGCGCGGGTGAAAATCACCGATTCGATCGGTCTGGTTCCGTTCGTCGATGCCGGCACGGTTTCGGAAAAGATGTTTCCGGACTTTTCGGATGTGCGCATCGGTGCCGGCCTCGGCATCCGCTATGCCACGCCGTTCGGGCCGATCCGGCTCGATGTCGCCGTGCCGCTCAATCGATATGACGGGGGCAGCAGTTACGGGATCTATGCCGGCATCGGCCAGGCTTTCTGA
PROTEIN sequence
Length: 642
MSKTLCKPKESIAYRRAGTVVTVAASALLCPVFATEAHAFKLFGITLWGEEEQAVDVIDPVRYSVTLNAGAADDALKTALENASHLVQDKDKPVSGELGLVIKARDDRDRLIATLYEKSRYGGVVTVLVDGTDIDQLPPTPVFDQSRPIPVTVEIKPGPAFKLGDIRFEGDALGRNPADYGLVAGGDASSLTILKAGDRIVEDLKNEGRPLARLDNRSVVADHETSEVDVVLTASGGPVAPVGNVGVKGQKSVDPEFIRTYSRINEGRPYNPENLKKAGERLRQLGVFSSVTVREGDALAPDGTIPVNITVAEGKHRYFGAGAQYSTIDGFGLQGYWGHRNLFGRAESLRLEAAVSRIGEASDYQKMDYSAGIIFSKPGFILPSATLNASIKAKTEHPDSYLANTVTAATGISYELSDQDTASAGVELSYSDTEDAFGDNEYLTFSLPLEYARDARDNKLDPTEGYRATLAAKPSYEIFGNTFFSSFEGSVSGYQSLGAGDRIVFAGKASLGTLVGAGNLEDIPATRRFYAGGGGSVRGYAYQEISPYDAKGDATGGRSYAVVSAEARVKITDSIGLVPFVDAGTVSEKMFPDFSDVRIGAGLGIRYATPFGPIRLDVAVPLNRYDGGSSYGIYAGIGQAF*