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SCNpilot_expt_1000_bf_scaffold_1822_curated_12

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(15234..15941)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CA86_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 235.0
  • Bit_score: 379
  • Evalue 1.80e-102
Uncharacterized protein {ECO:0000313|EMBL:EYR84001.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 235.0
  • Bit_score: 379
  • Evalue 2.50e-102
hypothetical protein; K07315 sigma-B regulation protein RsbU (phosphoserine phosphatase) similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 234.0
  • Bit_score: 345
  • Evalue 1.60e-92
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGATGGTGCTGCCGAAGCCGGCGGAACTGGGCGCCATCCAGAAGATCGAGGTTGCCGGCTACATGGAGCCGGCCGACGGGGGGGGGGGCGATTATTTCGACGTCCTGCACGACGGCTCCCGGATCAAGGTCGGCATCGGCGACGTGACCGGCCACGGCCTGGAAAGCGGCGTTCTGATGCTGATGGTCCAGTCGGTCGCCCGCGCGCTGCAGGAGCAGGGCGACGAAGACCCGCGGACCTTCCTCGAGGTCCTGAACCGGGCGATCTACAAGAACATCGAGCGCACCAAGACCGACAAGCATCTTTCGCTCGCCTTCCTCGACTACCAGGACAAGCACATCACGCTGTCGGGCCAGCATGAGGAGGTTCTGCTCGTTCGCCGCGAGGGAGAGGTCGAGCGGATCGATACGGTCGATCTCGGCTTCCCGATCGGGTTGGAAAGCGACATCGCGCCGTTCATCTCGACCCGCGACATTCCGTTCGACAGCGGCGATATCATCGTGCTGCACACGGACGGCGTGACCGAGGCGGAGAGCCCGACGGGCGAACTCTTCGGGCTGGAGCGGCTTTGCGAAAGCGCCCGCAAATACAGGGACTGCGACAGCGCCGAAGATATCAAGGAAGGCATCATCGCCGACCTGATGGCACATATTGCGACCCAGAAGATCCACGACGACATCACACTCGTAGTGATGAGGCACAGATAA
PROTEIN sequence
Length: 236
MMVLPKPAELGAIQKIEVAGYMEPADGGGGDYFDVLHDGSRIKVGIGDVTGHGLESGVLMLMVQSVARALQEQGDEDPRTFLEVLNRAIYKNIERTKTDKHLSLAFLDYQDKHITLSGQHEEVLLVRREGEVERIDTVDLGFPIGLESDIAPFISTRDIPFDSGDIIVLHTDGVTEAESPTGELFGLERLCESARKYRDCDSAEDIKEGIIADLMAHIATQKIHDDITLVVMRHR*