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SCNpilot_expt_1000_bf_scaffold_1822_curated_16

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 19475..20407

Top 3 Functional Annotations

Value Algorithm Source
Stage II sporulation protein E n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUK9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 297.0
  • Bit_score: 436
  • Evalue 2.20e-119
Stage II sporulation protein E {ECO:0000313|EMBL:EYR84004.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 297.0
  • Bit_score: 436
  • Evalue 3.00e-119
serine phosphatase RsbU, regulator of sigma subunit similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 260.0
  • Bit_score: 219
  • Evalue 1.70e-54

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
ATGAACGAAATGTCAAATCCTCAGTCTGACCAACAATCCCTGTCCCAGGACGAGAAGCAAGCGGAACTTGACCGCGCCCATGCGGAAATCGAGCGGCTCTCGGCCGAATTCGAAGATCTCAAACTGCTCTACGAAGCCATGATCGAGCATGGCGAAGCGGTGGAAGATCAGTTGGCCGAGAAGAACCTGCTTCTCGAAAAAACCCAGGCGCGCCTGGAAGAGGAACTCTCCGACGCGACGCGTTACGTCTTTTCCATCCTGCCGGACAAGAGAAACCAGGCGCCGAAGACCGACTGGCTGCTGGTGCCGTCGACGGAACTGGGAGGCGACTCCTTCGGTTATCACGCCCTCGACGACGACCACTTCGCTTTCTACCTGCTCGATGTCTGCGGCCATGGCGTCGGCGCCGCCCTGCTGTCCGTCACGGCGATCAACGTGCTGCGCGCCTCGGCGCTCACCAATGCCGATTTCCGCGATCCGACGCAGGTGCTTGCCGCGCTCAACGCCACTTTTCCGATGGAAAAACAAAACAATATGTTTTTCACCATCTGGTACGGCGTCTACAACAAGAGCACCGGGGAACTGCGTTATGCGACCGGCGGCCACCCGCCGTCGATCCTCATCCGCGCCGATGCGCCGGAGGCCGAGCCGGAACTGCTCATCACCATCGGCGGCATCGCGATCGGCGCCTTCCCGGATATCGACTACGAATGCAAGTCCGTCCATGTCGGACCCGGCGACCGTCTGCTGATCCTCAGCGACGGCACATTCGAGGTCAACGGCCCGGAAGGCGACATGCTCTCCGTCGATGATCTGGCGGCGTTCGCGGCCAAAACCGGCGACACCCCGACGGCCATCCACGAATGGGTCCGCACCTTCAACAGCGACGGGCCGCTGCCCGACGATTTTTCGCTGCTCGAAGTGCGTTTCTGA
PROTEIN sequence
Length: 311
MNEMSNPQSDQQSLSQDEKQAELDRAHAEIERLSAEFEDLKLLYEAMIEHGEAVEDQLAEKNLLLEKTQARLEEELSDATRYVFSILPDKRNQAPKTDWLLVPSTELGGDSFGYHALDDDHFAFYLLDVCGHGVGAALLSVTAINVLRASALTNADFRDPTQVLAALNATFPMEKQNNMFFTIWYGVYNKSTGELRYATGGHPPSILIRADAPEAEPELLITIGGIAIGAFPDIDYECKSVHVGPGDRLLILSDGTFEVNGPEGDMLSVDDLAAFAAKTGDTPTAIHEWVRTFNSDGPLPDDFSLLEVRF*