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SCNpilot_expt_1000_bf_scaffold_1909_curated_3

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 2133..3287

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate binding protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K1I0_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 394.0
  • Bit_score: 513
  • Evalue 2.20e-142
Uncharacterized protein {ECO:0000313|EMBL:GAK71938.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 386.0
  • Bit_score: 525
  • Evalue 8.00e-146
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 394.0
  • Bit_score: 513
  • Evalue 7.10e-143

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1155
ATGACGCGCCACACCGTTCCGGTCTCCATCCTCTATTCGACCACCGGCGCCTATGCCAGTCTCGGCCGCGAGGCGCTGGCCGGGGCCATGGCGGCGATCTCCGAGGTCAATGCCGATTCCAGCCTTGCCTTCCGGATCGAGCCGCGGATCGACGATCCCGCCGGCCGGGCGGAACGGTATGCGCTGCTGTCGGAGGCGGCGATCCGCGACCATGGCTGTCGCCATGTCATCGGAACGATCACCTCCTGGAGCCGCAAGGACGTGCTGCCCATCGTCGAGCGCCGCGGCGCGCTGCTCTGGTACGGTTTTCCCTATGAGGGCTACGAGGCGAGCGAAAGCGCCATCTATCTCGGCGCCTGTCCGAACCAGCACCTGCTGCCGCTGTTCGATCACATGCTGCCCCGCTACGGCCAGCGGCCGTTCATCGTCGGTTCCAACTACATCTGGGGCTGGGAAATCAACCGGCTGGCCCGCGAGGTCACGGAAGCGGCCGGCGGGCAGGTGGTGGCGGAACGCTTCGTGCCGCTCGGCTCGACCGAGATCGAGCACCTGATCGCCGAGATCCACCAGAAACAGCCGGATTTCGTGCTCTGCAACCTCGTCGGCGAATCGGCGACCGCCTTCATCGCCGCCTATCACGCCCTGCGCGAAACAGTACCGGTGCCGCCCGTCGCCACCTGCAACGTCACCGAGCTGGAACTCGAAAACCTCGACGTCCCGGCCCGGGCCGGACACATCTCCACATCCATCTATTTCGACGACCTGGACACGCCGGAGAACCGTGATTTCAAGGCGCGCATGGCGCTGCGGCACGGCCGGGAACGGCGGCTGACCACCTCCTTCGTCGGCGCCTACATGAGTGTTTCCATCCTGGCGCGCGCCATCGCCGATGCCGCGACCGATGCACCCGATGCCATCCGCGGCACTGTCACCTCCCGGCTGTTCGACACGCCGATCGGCCAGGTCGGCATCGATCCGCGCACCCAGCACGCCAGCCTGCGGCCGCATCTGGCGTTTTCGGACCGGAACGGCGAGTTCCGCATCATCAGCAGCGCGCCGGCCGCCATCGAGGCGGACCCGTTTCTGGTCCACGCGCTCGGCAAACCTGCCCTCGGCAAGGACAACACCGGACCGGTGTTGAAGGTGATCAAATGA
PROTEIN sequence
Length: 385
MTRHTVPVSILYSTTGAYASLGREALAGAMAAISEVNADSSLAFRIEPRIDDPAGRAERYALLSEAAIRDHGCRHVIGTITSWSRKDVLPIVERRGALLWYGFPYEGYEASESAIYLGACPNQHLLPLFDHMLPRYGQRPFIVGSNYIWGWEINRLAREVTEAAGGQVVAERFVPLGSTEIEHLIAEIHQKQPDFVLCNLVGESATAFIAAYHALRETVPVPPVATCNVTELELENLDVPARAGHISTSIYFDDLDTPENRDFKARMALRHGRERRLTTSFVGAYMSVSILARAIADAATDAPDAIRGTVTSRLFDTPIGQVGIDPRTQHASLRPHLAFSDRNGEFRIISSAPAAIEADPFLVHALGKPALGKDNTGPVLKVIK*