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SCNpilot_expt_1000_bf_scaffold_1909_curated_6

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 4876..6573

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K1H7_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 558.0
  • Bit_score: 904
  • Evalue 5.10e-260
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAK71941.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 565.0
  • Bit_score: 961
  • Evalue 3.80e-277
hypothetical protein; K02035 peptide/nickel transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 558.0
  • Bit_score: 904
  • Evalue 1.60e-260

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1698
ATGGGTCTCAATTTTTCTTTCCTTACCCGCAAGACCGGCCAGTTGCTGGCCGGCGTGCTGCTGGCGCAGACGGCGCTGTGCAGCGCCGCACTCGCCGAAGACCGTGCGGAGCTGATGGCGAAACACCGCGGCGGCACGATGACGCTCGCCGCCGTTTCCGCTGCCGGCACCATCGATCCGATGATCAACTACACCGCCCAGTTCTGGCAGATCTACCAGATGACCTATGACGGCCTCGTCAAGTTCAAGCAGGCCGGCGGAACCGACGGCTTCGAGATCGTCCCGGCCATCGCCGAGGCGATCCCGCAGGCGGAAAACGACGGCAAGACCTATGTCTTCAAGATCCGCAAGGGCATCATGTTCTCCAACGGCAAGGAAGTGACGCCGTCCGACGTGCTGGCCTCGTTCCAGCGCATCTTCAAGGTCAAGGGCCCGACGACCGGCAGCTTCTACGGCGGCATCGTCGGCGCCGACAAGTGCATCGAGGCGGCCGAGACCTGCACGCTCGAAGGCGGCGTGATCGCCGACGACGCAGCCGGCACGGTGACGATCAACCTCACCGCCCCGGATGCCGAGTTCTTCTCCAAGCTCGCCGTGCCGCACGCCTCGATCCTGCCGGCCGACGCGCCGCTGGCCGATGCCGGCACCACGCCCATTCCCGGCACCGGCGCCTATTTCTTCGAAAGCTACAATCCCAACGAACAGCTGGTCATGAAGCGCAATCCGCACTTCAAGGAGTGGAGCGTCGATGCGCAGCCCGACGGCTTTGCCGACGAGGTCATCTACAAGTTCGGCCTGACGGAAGAAGCGGCGATCAACGCCATCATCAACGGCCAGCTCGACTGGCTGTACGATACGCCGCCGGCCGACCGCCTGCCGGAAATCGGCTCGAAATATGTAAGCCAGATCAAGATCGACCCGCTGGCCGCCTTCTGGTACGCGCCGATGAACACCAACCTCGCGCCCTTCAACGATGTGAGGGTTCGCCAGGCGGTGAACTACGCACTCGACCGCGATTCGCTCGTCGGCCTGTTCGGCGGCGAAGTGCTGGCCCAGCCGACCTGCCAGATCCTGCCGCCGGACTTCCCCGGCCATGTCGACGACTGCATCTACACCAAGGAACCCGGCCCGACCTGGGCTGAGCCCGACATGGAAAAGGCGATGCAGCTCGTCGAGGAATCCGGCACGAAGGGCCAGAAGGTCACCGTCATTGCCGAGGACAACGCCGTTGCCCGCGGCATCGGCACCTACATCCAGAGCGTCCTGTCGGAACTCGGCTACGACGCTTCGATGAAGGCGGTTTCGCCGAACATCCAGTTCACCTACATCCAGAACACCAACAACAACGTGCAGATCAGCATTTCGCAGTGGTACATGGATTATCCGGCCGCTTCGAACTTCCTGAACGTGCTGCTGTCGTGCGCGTCGTTCACGCCGGGCAGCGATTCCTCCGTCAACATGTCCGGCTACTGCAACAAGGACCTGGACGCGACGATGAAGGACGCCATGACGCTGGCGCTGACCGACCAGAATGCGGCCAATGCCAAGTGGGCGGAAGCCGACAAGGGTTTCATGGAACAGGCACCGATGGCGCCGCTGTTTACGCCGAAGAGCGTCAACTTCACCTCGGCACGGCTGGGTAACTACCTGTTCAACAAGCAGAACCGCTGGATCATCTCGCAGTCCTGGGTTCAGTAA
PROTEIN sequence
Length: 566
MGLNFSFLTRKTGQLLAGVLLAQTALCSAALAEDRAELMAKHRGGTMTLAAVSAAGTIDPMINYTAQFWQIYQMTYDGLVKFKQAGGTDGFEIVPAIAEAIPQAENDGKTYVFKIRKGIMFSNGKEVTPSDVLASFQRIFKVKGPTTGSFYGGIVGADKCIEAAETCTLEGGVIADDAAGTVTINLTAPDAEFFSKLAVPHASILPADAPLADAGTTPIPGTGAYFFESYNPNEQLVMKRNPHFKEWSVDAQPDGFADEVIYKFGLTEEAAINAIINGQLDWLYDTPPADRLPEIGSKYVSQIKIDPLAAFWYAPMNTNLAPFNDVRVRQAVNYALDRDSLVGLFGGEVLAQPTCQILPPDFPGHVDDCIYTKEPGPTWAEPDMEKAMQLVEESGTKGQKVTVIAEDNAVARGIGTYIQSVLSELGYDASMKAVSPNIQFTYIQNTNNNVQISISQWYMDYPAASNFLNVLLSCASFTPGSDSSVNMSGYCNKDLDATMKDAMTLALTDQNAANAKWAEADKGFMEQAPMAPLFTPKSVNFTSARLGNYLFNKQNRWIISQSWVQ*