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SCNpilot_expt_1000_bf_scaffold_1271_curated_8

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 5937..7217

Top 3 Functional Annotations

Value Algorithm Source
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 426.0
  • Bit_score: 748
  • Evalue 6.40e-213
serS; Seryl-tRNA synthetase (Serine--tRNA ligase) (EC:6.1.1.11) similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 426.0
  • Bit_score: 745
  • Evalue 7.20e-213
PREDICTED: serine--tRNA ligase, cytoplasmic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C144B9 similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 426.0
  • Bit_score: 748
  • Evalue 4.60e-213

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1281
ATGCACGATATTAAATGGATCCGCGACAATGCCGAGGCTTTTGACGCCGCGCTGAAGAAGCGCGGCGCGGATGCGCAGTCGGAAAGCCTGATCGCGCTGGACGAAAAACGTCGCGCCGTGATCCAGCGCCTGCAGGACATGCAGGCCCGCCGCAATACGGCCTCCAAGGAAATCGGCGCGGCCATGGCGCAGAAGAATTCCGAACTGGCCGAAAAGCTCAAGGCCGAAGTGGCCGAGATGAAGACCTCGCTGCCGGCGGCGGAGGAAGAGGAACGGCTGATCAGCGCCGAGTTGACCGACGTCCTGTCGCGCCTTCCCAACATCCCGCTGGATGACGTACCGGTCGGCCAGGACGAACACGACAACGTCGTCAAGCATGTCATCGGTCAGAAGCCCGGCTGGAACCATCCGGCCAAGGAACATTACGAAATCGGCGAAGCCCTAGGCCTCATGGATTTCGACCGTGCGGCCAAGCTTTCGGGTGCCCGATTCACGGTTCTGACCGGTCCGCTGGCGCGTCTCGAACGGGCGCTCGGCCAGTTCATGCTCGACCTGCACACGCGCGAGCACGGTTATACCGAGGTCAGTTCGCCGCTGATGGTGCGCGACGAAGCCATGTACGGCACCGGCCAGCTACCGAAGTTTTCCGAAGACCTGTTCAAGACCACGGATGGCCGCTGGTTGATCCCGACCGCCGAGGTGACGCTGACCAACCTCGTATCCGGCGAAATCCTTGAACAGGACAAGCTGCCGCTGCGCTTCACGGCATTGACGCCGTCCTTCCGTTCGGAGGCCGGTTCGGCCGGTCGCGATACGCGCGGCATGCTGCGCCAGCACCAGTTCTGGAAATGCGAGCTCGTGTCGATCACCGACGCCGAAAGCTCGATTGCCGAACATGAGCGCATGACGGAATGCGCCGAAAAGGTGCTGAAACTGCTCGGCCTGCATTTCCGCACCATGACGCTGTGCACCGGCGACATGGGTTTTGGCGCCCGCAAGACCTACGATATCGAAGTGTGGCTGCCGGGGCAGGATACCTACCGCGAAATCTCTTCCTGCTCGGTCTGCGGCGACTTCCAGGCGCGGCGCATGAATGCCCGCTACCGCGGCAAGGACGACAAGGCCACGAAGTTTGTGCACACGCTGCACGGCTCCGGCATCGCCGTCGGCCGGGCGCTGATCGCGGTCCTGGAGAACTATCAGAATGAGGACGGCTCCGTCTCGGTGCCGGATGTGCTGCTGCCCTATATGGGCGGACTGACGAAGATCGAACGGGCCTGA
PROTEIN sequence
Length: 427
MHDIKWIRDNAEAFDAALKKRGADAQSESLIALDEKRRAVIQRLQDMQARRNTASKEIGAAMAQKNSELAEKLKAEVAEMKTSLPAAEEEERLISAELTDVLSRLPNIPLDDVPVGQDEHDNVVKHVIGQKPGWNHPAKEHYEIGEALGLMDFDRAAKLSGARFTVLTGPLARLERALGQFMLDLHTREHGYTEVSSPLMVRDEAMYGTGQLPKFSEDLFKTTDGRWLIPTAEVTLTNLVSGEILEQDKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDAESSIAEHERMTECAEKVLKLLGLHFRTMTLCTGDMGFGARKTYDIEVWLPGQDTYREISSCSVCGDFQARRMNARYRGKDDKATKFVHTLHGSGIAVGRALIAVLENYQNEDGSVSVPDVLLPYMGGLTKIERA*