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SCNpilot_expt_1000_bf_scaffold_1271_curated_11

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 8831..10444

Top 3 Functional Annotations

Value Algorithm Source
Lipoprotein LppB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5F0E1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 549.0
  • Bit_score: 607
  • Evalue 1.60e-170
Lipoprotein LppB {ECO:0000313|EMBL:EYR82412.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 549.0
  • Bit_score: 607
  • Evalue 2.20e-170
peptidase similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 550.0
  • Bit_score: 596
  • Evalue 8.80e-168

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1614
ATGCGTCACAGTGTATCGCCGAGTATCGGAAAGTCTGCCGTACGTGTTCTTGCCGCGGCATTGCTGGCCAGCGCGGTCAGTGGTTGCAGTTCCGATGTTTCGCGTTTCGGCGGACTGTTTTCCAAGTCCGACAACATCACGACGAACTCGATTCCGCGTCGTCCCATCACCGGTTTGAATGGCGAAGCTCCGATCCCGTCCCAGGATGTGGCGCAGGGCGTCAATACGCGGCGCGAGCCGCTGTCGACACGCGACGAGGCCCTGAACCAGCCGTTCCCCGAAAAACGCCAGATTTCCTACGATCCGATCAGCACGGCCACGGCAAACGGTTCCGGTGCGCGCATGGCGACGACCCCCGTCGAGGTCCAGCGTTCCGAGCTTGCCGATCCGACCGTCGGTAAAACCACCAAGTCCGAACGCGACGTGGCGCTGGCGCAGCCGTTCCCCACCTCGAAGAAGGATACGGCGGAAAAGACCACGCCCGATCCGCTGACGACCGGCACGACATCCAAGGGCGGCTGGACCACCTTCAATGCGCCCAGCGTCAAGCTGAAGCCGGGCGAGTCCGTCGCGACCCTGTCGAAGCGGTACGGCGTGCCGGAAAAGGAAATTCTGCAGGCGAACGGCCTGAAGAATGCGTCCGCCGTCGTTCCCGGTCAGAAGATCGTCATTCCGACCTATGGCAAGCCGCGCAGCGTTGCCAAGGAAACGGCGGAGACGGCGGACCTTGCCTCCGACAAGAAGATCCCCATTCCGGAAAAGACACCGGACCAGGTTGCCGTGCTACCGACCACGTCGTCGAGCCGCGACAAGTCCCAGACGACCGCCGACGCCGCTAACGGCAAGCTGACGCCGGCCGATGGCGGCAAGAAGAAGGGCGACAAGGCGGCAACTGCCGCAACGGACGCCTATGTCGTCAAGCCCGGCGACTCGCTCGCCAAGATCGCCAAGGCGACCGGTGTTTCCGTTCAGGAACTCAAGGCCGCAAACGGCATGAACACCGCGTCGCTGCGCATCGGCCAGACGCTGAAGGTTCCGGCCGGCACCGGCAATGCCGACGACGTCAAGACCGCGTCGATCCCGACCGGCAAGGAAACGAAGAAGGGCGACACCAAGAAGGTCGAGACCGCCTCGACCGGCAAACAGCCCGAGGAATACAAGGCCCCGATTTCGAAGCAGACCGTCGCCGACGTCGAGAAGAAGAGCGACGTCACCGAGGCTGCACCCGAGACGACCGGCATCGGCAAGTATCGCTGGCCGGTGCGCGGTGCGGTGGTCGCCGGTTACGGCGCCAATGTCGAGGGCAACCGGAACGACGGCATCGATATCTCCGTTCCGGAGGGCACGCCGATCAAGGCCGCCGAAAACGGTGTGGTCATCTATGCCGGCAACGGCCTGAAGGAACTCGGCAACACCGTCCTGGTCCGCCACGACGACGGCACGGTGACCGTCTACGGCCATGCCGACGCGCTCAACGTCGCACGCGGCCAGAAGGTGACGCGCGGCCAGGAACTGGCGACCTCGGGCATGAGCGGCAACGCCAAGTCGCCGAAGGTGCATTTCGAGGTCCGCAAGAACGCCACGCCGGTCAACCCGATGACGTTCCTCGAATAG
PROTEIN sequence
Length: 538
MRHSVSPSIGKSAVRVLAAALLASAVSGCSSDVSRFGGLFSKSDNITTNSIPRRPITGLNGEAPIPSQDVAQGVNTRREPLSTRDEALNQPFPEKRQISYDPISTATANGSGARMATTPVEVQRSELADPTVGKTTKSERDVALAQPFPTSKKDTAEKTTPDPLTTGTTSKGGWTTFNAPSVKLKPGESVATLSKRYGVPEKEILQANGLKNASAVVPGQKIVIPTYGKPRSVAKETAETADLASDKKIPIPEKTPDQVAVLPTTSSSRDKSQTTADAANGKLTPADGGKKKGDKAATAATDAYVVKPGDSLAKIAKATGVSVQELKAANGMNTASLRIGQTLKVPAGTGNADDVKTASIPTGKETKKGDTKKVETASTGKQPEEYKAPISKQTVADVEKKSDVTEAAPETTGIGKYRWPVRGAVVAGYGANVEGNRNDGIDISVPEGTPIKAAENGVVIYAGNGLKELGNTVLVRHDDGTVTVYGHADALNVARGQKVTRGQELATSGMSGNAKSPKVHFEVRKNATPVNPMTFLE*