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SCNpilot_expt_1000_bf_scaffold_1271_curated_21

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 17431..17937

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C781_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 168.0
  • Bit_score: 188
  • Evalue 4.30e-45
Uncharacterized protein {ECO:0000313|EMBL:EYR82426.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 168.0
  • Bit_score: 188
  • Evalue 6.00e-45
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 167.0
  • Bit_score: 176
  • Evalue 5.30e-42

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
GTGCGCCATCTCGCCTACCTGCTGATGCTGGCCTGGCTGGTCTGGTATTATGTCAGCCATGACAGCGTGCCGACCGCCATCCTGCTCGCCATTGTCGGCGCCGTCGGTTTCCTGTTGTCGGGCCTGCCGCAGTCGCCGCTCTATCCGGCGGCAAAACGCGCCGGCGCGGCGCCCGCCTTCTATACCTGCCTGTTGTGCATGATCGGCCTTGGCCTGCTGCACATCGAATATGACGAATCGATGGGCCGCCTGGTGGTGGGCGTGCTGACGATGATCGCCGCCGTCACCTCGATTGCGGTGTGCGGACGGGACAATGGTGTCGTCCGGTATCTCGGCTACATCGCCTTTGCCGGCGAAATTCTGTATCTCTCGTCGATGACCGTCGGTTCGATCATCGGTACCTCCGGCCTCTTCCTCGTCTCGGGCCTGGTGGTCGGCTTTACGGCCTGGGCCGTCATCCAGCTTGAAAAACGCCTTGCCGGCAGGGCGGCGGAGGTGAAGGCATGA
PROTEIN sequence
Length: 169
VRHLAYLLMLAWLVWYYVSHDSVPTAILLAIVGAVGFLLSGLPQSPLYPAAKRAGAAPAFYTCLLCMIGLGLLHIEYDESMGRLVVGVLTMIAAVTSIAVCGRDNGVVRYLGYIAFAGEILYLSSMTVGSIIGTSGLFLVSGLVVGFTAWAVIQLEKRLAGRAAEVKA*