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SCNpilot_expt_1000_bf_scaffold_1271_curated_27

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(23970..24413)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003614836 similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 147.0
  • Bit_score: 270
  • Evalue 1.30e-69
Uncharacterized protein {ECO:0000313|EMBL:KEQ10225.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 147.0
  • Bit_score: 267
  • Evalue 8.80e-69
radC; DNA repair protein RadC; K03630 DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 147.0
  • Bit_score: 259
  • Evalue 5.40e-67

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Taxonomy

Rhizobium sp. R2-400B4 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
GTGGCGCTCGACCTGAAGCTCGTCTCCGCCGTCGCCCATCGCTCTTTGAAAAGTGACCTGCGCGGCCGGCAGGTTCTGTCCTCCTGGTCGTCGGTCATCGATTATTGCCACGCGGCCATGGCACACGAACCGCGTGAACAATTCCGCATTCTCTTCCTCGACAAGCGCAACACGCTGATCGCCGACGAGATCCAGGGCAAGGGCACCGTCGACCATACGCCGGTCTATCCGCGCGAGGTGGTGAAACGCGCCCTGGAATTATCGGCTACAGCCTTGATTTTAGTACATAATCACCCTTCCGGGGACCCAACCCCGTCGCGTGCCGATATCGACATGACGCAGTTGATCATCTCAACGGCCAAGCCGCTCGGCATCACCGTGCATGACCACATCATCATCGGCAAGGACGGTCATGCCAGCCTCAAGGGGCTGAGACTGATCTGA
PROTEIN sequence
Length: 148
VALDLKLVSAVAHRSLKSDLRGRQVLSSWSSVIDYCHAAMAHEPREQFRILFLDKRNTLIADEIQGKGTVDHTPVYPREVVKRALELSATALILVHNHPSGDPTPSRADIDMTQLIISTAKPLGITVHDHIIIGKDGHASLKGLRLI*