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SCNpilot_expt_1000_bf_scaffold_1271_curated_34

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 31718..33523

Top 3 Functional Annotations

Value Algorithm Source
recJ; single-stranded-DNA-specific exonuclease; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 600.0
  • Bit_score: 952
  • Evalue 5.40e-275
Single-stranded-DNA-specific exonuclease protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JEJ6_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 600.0
  • Bit_score: 952
  • Evalue 1.70e-274
Single-stranded DNA exonuclease {ECO:0000313|EMBL:KEA06937.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 600.0
  • Bit_score: 955
  • Evalue 4.90e-275

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1806
ATGGTCGATCTTTCGCCCGATCCCGTCCCGCGCGCCTTTCTCGGCGTCGAACGCTCGGTTTCCGACCAGCGCTGGGTGTCCCGCCTCGACCAGGCGGGACAGAACAGGGCGCTGGCAATCGCGCAGGTCCACGGACTGCCGGACCTGACGGCGCGGGTACTCGCCGGCCGCGGCGTCGGCGTCGACGAGGCCATGGCTTTCCTCGACCCGACCATCCGCACCCTGATGCCCGACCCGATGAAGCTGACCGATTGCGGCAAGGCGGCGGAGCGCCTGGCGAGGGCGATCCGGTCCGCCGAAAAGGTGGCGATTTTTGGCGACTACGACGTCGACGGGGCGGCATCCTCAGCCCTGATGTCGCGTTTCCTCGGTCATTTCGGTATCGAGGCGACGATCTATATTCCGGACCGCATTTTCGAAGGCTATGGCCCCAATCCCGCCGCCATCGATCACTTGATCGACGAGGGTGCCGAACTGATCGTCACCGTCGATTGCGGCTCGACCAGCAACGAGGCGCTCGCCGCCGCGGCCAGGCGCGGCATCGACGTCGTCGTCATCGATCATCACCAGATGTCGCACGACATGCCGGCCTGCCATGCGCTGGTCAATCCGAATCGCGAGGACGATCTGTCGGGGCAGGGACATCTCTGCGCCGCCGGCGTCGTCTTCCTCGTTCTGGTCGCCACGGCAAAGGTCCTGCGCGAAGGCGGCGATCCGCGCGCCCGCACCGTTGATCTGCTCGCCTGGCTCGACCTGGTGGCGCTGGCGACGGTTTGCGACGTCGTGCCGCTGAAGGAGCTGAACCGCGCTTATGTCGTCAAGGGACTGCTGGCGGCACGGCATATGGGCAATGCCGGCCTGGCTGCACTGTTCCGCAAGGCGGGGCTGGGCGGGCCGGTGACCCCCTATCATCTTGGTTTTCTGATCGGCCCGCGCATCAATGCCGGCGGGCGAATCGGCAATGCGGCGCTGGGAAGCCGGCTGCTGACGCTCGACGACAATTCCGAGGCGGAAACCATTGCGGCGCAGCTGGATGAGCTCAACCGCGAACGCCAGGCGATGGAAGCGGCGATGCTGGCAGAGGCGGAAGCCGAGGCCGCTGCCGAATATGGCGACGGTTCGAGCGCCTCGGTGATCGTCACCGCGCGCGAAGGCTGGCATCCCGGCATCGTCGGCCTGCTGGCGGCGCGGTTGAAGGAAAAGTTCCGCCGTCCCGCATTCGCCATCGCCTTCGACCCGTCGGGCAAGGGCACCGGCTCCGGCCGCTCGATCAGCGGCTTCGATCTCGGCAGGATGGTGCGTGGGGCGCTGGACGAGGGATTGCTGGTCAAGGGCGGCGGTCACGCCATGGCGGCGGGGCTGACGGTGGAACGCGGCAATCTCGGCCGGCTGCGGACCTTCTTCGAGGAACGTGCCCAGAAGGGTGTCGCCTCGCTCGTCTCCAACCAGTCATTGAAGATCGACGGCGCGCTCGGCGCTTCCGGCGCGACCCTCGAGCTGATCGACCAGCTGGAAACGGCCGGTCCCTACGGGTCCGGCCACCCGCAGCCGATTTTCGCCGTCCCCATGCACCGCTTGGCGGATTCGCGCCTGGTCGGCGCCTCGCATATCAAGGTGACGCTGGAGGCGGCGGATCGTGTCCGGCTGGAAGGCATCGCGTTCAGGGCGGCGGGCACCGCCCTGGGCGACATGCTCCTGAATTCCCGCGGCCGGCAGATCCATGTCGCCGGCACGCTCAGCGCCGATTTCTGGCAGGGAACGAGGCGCGTGCAGATCCGCGTTCTTGATGCCGCCCTCGCCATCTGA
PROTEIN sequence
Length: 602
MVDLSPDPVPRAFLGVERSVSDQRWVSRLDQAGQNRALAIAQVHGLPDLTARVLAGRGVGVDEAMAFLDPTIRTLMPDPMKLTDCGKAAERLARAIRSAEKVAIFGDYDVDGAASSALMSRFLGHFGIEATIYIPDRIFEGYGPNPAAIDHLIDEGAELIVTVDCGSTSNEALAAAARRGIDVVVIDHHQMSHDMPACHALVNPNREDDLSGQGHLCAAGVVFLVLVATAKVLREGGDPRARTVDLLAWLDLVALATVCDVVPLKELNRAYVVKGLLAARHMGNAGLAALFRKAGLGGPVTPYHLGFLIGPRINAGGRIGNAALGSRLLTLDDNSEAETIAAQLDELNRERQAMEAAMLAEAEAEAAAEYGDGSSASVIVTAREGWHPGIVGLLAARLKEKFRRPAFAIAFDPSGKGTGSGRSISGFDLGRMVRGALDEGLLVKGGGHAMAAGLTVERGNLGRLRTFFEERAQKGVASLVSNQSLKIDGALGASGATLELIDQLETAGPYGSGHPQPIFAVPMHRLADSRLVGASHIKVTLEAADRVRLEGIAFRAAGTALGDMLLNSRGRQIHVAGTLSADFWQGTRRVQIRVLDAALAI*