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SCNpilot_expt_1000_bf_scaffold_9171_curated_2

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(669..2105)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 477.0
  • Bit_score: 743
  • Evalue 1.40e-211
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 477.0
  • Bit_score: 732
  • Evalue 7.00e-209
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=B5ZWJ8_RHILW similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 477.0
  • Bit_score: 732
  • Evalue 2.20e-208

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Taxonomy

Rhizobium sp. R2-400B4 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1437
TTGAAGTGGCTTTGGACAACCGACGAAATGATTTCTGCCATGGTGGGGCGGCCGATCGGCACCCTGCCGGAGGGCGTGACCGGCATTTCGATCGACAGCCGCAGCATCTCCGAAGGCGAAGCCTTCTTTGCCATCAAGGGCGACCGGGTCGACGGGCATAATTATGCCAGCATCGCCATGGCGAACGGTGCCTCGCTTCTGGTGATCAGCGAAGCCAAGCTTCCGGCCTTGGGCCGCCTGACCGTGCCGATGATCGTCGTCGACGACGTGCTGGCCGCACTCGGCAGGCTGGGTGCCGCAGCAAGGGCGCGGACTGCGGCGAAGATCGTCGCGGTGACCGGTTCCGTCGGCAAGACGACGACCAAGGAGATGCTACGCCATGTGCTGGAGCCGTCCGGCAAGGTGCATGCGGCGGTCGCTTCCTTCAACAATCACTGGGGCGTGCCGCTGACGCTGGCCCGCATGCCGGCCGATACCGCCTTCGGCGTCTTCGAGATCGGCATGAACCATCCGGACGAGATCCGGCCGCTGGTCAAGCTGGTGCGCCCGCATGTGGCGATCATCACCACCATCGCCGCCGCCCATCTCGGCAATTTCCGTGACCTGCGCGAGATCGCCGCCGCCAAGGCGAAAATCTTCGAGGGCGTCGAGCCGGGCGGCGCAGTCGTCCTCAACCGCGACAACGAGCAATACGACTTCCTGGAGAAGACGGCGCAGAATTGCGGCATCGAGCACATCTATTCCTTCGGCCAGCATGCCAAGGCAGATTTCCGGCTGGCGGATTTCGACGGGTCGGCGGAAGGCTCGATCGTCTGGGCGACGCTTGGCGGCGAGACGACCGAGATCCTGATCGGCGCGCCCGGCCGGCACATCGCCGAAAACGCCATGGCCGCACTCGGCACGGCGATGCTTGTCGGCGCCGATCTTGCCGAGGCGGTTGCCGCGCTGGAAGACCTGAAGGCGGTCAAGGGGCGCGGCCAGCGCCATCGCCGCGCCATCGGCCACGACAGCTTTTTCACACTGATCGACGAAAGCTACAATGCCAACCCGGCCTCGATGCGCGCTGCTTTGGCGCTGCTTGCCTCGGCGCAGCCGGAAGGCGAGGGGCGGCGGGTGGCCATTCTCGGCGACATGCTGGAAATGGGTGAATTCGCGGCGCAGGTGCATGCCGAGCTGGCCTCGCCGCTGCTCGCAAGCGGCATCGAGCATGTCTGGCTTTCCGGACCCGAGATGGCGCATCTGCGCGACGCCTTGCCCTCCAGTATCCATGTCGAATATCGCGCCGCGACCGAAGACATGGTGAAATTTGCCGCCGCGTCGGTGATGCCGGGCGATGTGCTGATGATAAAATCCTCGCTCGGCATCGGTTTCGGCAAGATCGTCGCGGCGCTGCTTGACAAATATCCTGCGTTTTCCGACACGGAGCGCCAATCTTGA
PROTEIN sequence
Length: 479
LKWLWTTDEMISAMVGRPIGTLPEGVTGISIDSRSISEGEAFFAIKGDRVDGHNYASIAMANGASLLVISEAKLPALGRLTVPMIVVDDVLAALGRLGAAARARTAAKIVAVTGSVGKTTTKEMLRHVLEPSGKVHAAVASFNNHWGVPLTLARMPADTAFGVFEIGMNHPDEIRPLVKLVRPHVAIITTIAAAHLGNFRDLREIAAAKAKIFEGVEPGGAVVLNRDNEQYDFLEKTAQNCGIEHIYSFGQHAKADFRLADFDGSAEGSIVWATLGGETTEILIGAPGRHIAENAMAALGTAMLVGADLAEAVAALEDLKAVKGRGQRHRRAIGHDSFFTLIDESYNANPASMRAALALLASAQPEGEGRRVAILGDMLEMGEFAAQVHAELASPLLASGIEHVWLSGPEMAHLRDALPSSIHVEYRAATEDMVKFAAASVMPGDVLMIKSSLGIGFGKIVAALLDKYPAFSDTERQS*