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SCNpilot_expt_1000_bf_scaffold_853_curated_6

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(4170..5453)

Top 3 Functional Annotations

Value Algorithm Source
O-antigen polymerase n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) RepID=A3PR20_RHOS1 similarity UNIREF
DB: UNIREF100
  • Identity: 30.5
  • Coverage: 403.0
  • Bit_score: 178
  • Evalue 1.50e-41
O-antigen polymerase similarity KEGG
DB: KEGG
  • Identity: 30.9
  • Coverage: 404.0
  • Bit_score: 178
  • Evalue 4.60e-42
O-antigen polymerase {ECO:0000313|EMBL:ABN78786.1}; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.5
  • Coverage: 403.0
  • Bit_score: 178
  • Evalue 2.00e-41

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Taxonomy

Rhodobacter sphaeroides → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
ATGGCCGGAGACCCGCGATGCATCGCCATGAATGCATCGCGACTTTTCGAAACCGCCGTCGTCCTGGCCCTGATCGTTTCGACCGGCACCTTCGCACCGAGCCAGCAGACGCCGGCCGGCATGGCGACCGAAAGCGGTTTCCTCAACCAGTCGCTGCTGTTGTCCACCTTTGCAGCGGTCATCGGTCTCGGCCTGCTCGGGCGAGGCATCGCCTTTCGCGGCACGCTGTCAGAATGGCTGGTCGGCCTCATTCTCTTCTGGTCCGCACTTTCGGTTTTCTGGTCGGTTCGCCCGGAGGCAACGGCGGTGCGAAGCTTTGCACTGATGCTGACGGTGCTCGTCGCCGCCTTCGCCGTCCAGAATGTCGGCCGGCGCGGTTTCATCACCCTTGCCGGCCGCGCCATACTGATCGTGCTGGCGATCAATATCTTCGTGGTCTTTTTCCTGCCGCAGGTCGGCATTGCCGGCTTTCCGACGGAAGGCGCCTGGCGTGGCCTCTTTAACCAGAAGAACGTGCTCGGCCGCATCGCCCTGATCGGCCTCCTCATCGGCCTCTTCCGCGGATTTTCGCCGATCCGCCGCGAGCGGGTGGAAGGCGTGATGCTCCTGTCCTTGTCCGCCGCCGCCGTCATCGGAACCCGTTCGGCAACGGCCGTTATCGTCGTCATTCTCGCACTCGGATTTCTGGCACTGATCCTGATGTTGCGGTACGCCCGCATCGGCATCGGTATTGCAACGCTTGTCGTCTGCCTCGGCAGCATGCTCACCGCCTCCGTTACGCTGCTCTCCTTCGACGGCATGGCGATGGCTATCGGCAGAAGTACGACATTGTCGGGCCGGTTGCCGCTTTGGGACGAATTGCTGCGGATCGGCGGGGAAACACCCCTGCTCGGCATGGGATACGGCGCCTTCTGGTCGTCGGGCCACGAGGAGGTCCTCTCGCTCTGGAGCCGGCTGGGCTGGATGCCGGTGCAGGCCCACAATGGCTATATCGAGATTTTCCTGCAGCTCGGTGCCGTCGGGCTTCTCCTGGTCATGATGCTGCTCGCCGGTCTGGCCTGCTCGTCGTTTTTCCGCTTCATGCGCGATGGCGACAGCAGCCGGCTGCTCGCCTTCATTCTTTCGGTGACGATTGCCGTGCTGTCGCTGACCGAAGCGGTGCTGCTGGTGCAGAACAACATTTTCACCATCCTCTTCGTCGCCTTGCTGCCCGGCATGCCCGCCGCCGCCGACGAACGCCTGCCGCGGCAGGAGGAAACGCTTGAAGATCCTGTTCCTGTATAG
PROTEIN sequence
Length: 428
MAGDPRCIAMNASRLFETAVVLALIVSTGTFAPSQQTPAGMATESGFLNQSLLLSTFAAVIGLGLLGRGIAFRGTLSEWLVGLILFWSALSVFWSVRPEATAVRSFALMLTVLVAAFAVQNVGRRGFITLAGRAILIVLAINIFVVFFLPQVGIAGFPTEGAWRGLFNQKNVLGRIALIGLLIGLFRGFSPIRRERVEGVMLLSLSAAAVIGTRSATAVIVVILALGFLALILMLRYARIGIGIATLVVCLGSMLTASVTLLSFDGMAMAIGRSTTLSGRLPLWDELLRIGGETPLLGMGYGAFWSSGHEEVLSLWSRLGWMPVQAHNGYIEIFLQLGAVGLLLVMMLLAGLACSSFFRFMRDGDSSRLLAFILSVTIAVLSLTEAVLLVQNNIFTILFVALLPGMPAAADERLPRQEETLEDPVPV*