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SCNpilot_expt_1000_bf_scaffold_853_curated_30

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(27884..28183)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=10 Tax=Rhizobium/Agrobacterium group RepID=RL28_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 96.0
  • Bit_score: 179
  • Evalue 1.50e-42
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 96.0
  • Bit_score: 179
  • Evalue 4.80e-43
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 96.0
  • Bit_score: 179
  • Evalue 2.10e-42

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Taxonomy

Agrobacterium sp. ATCC 31749 → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGTCGCGTGTATGCGAATTGACCGGCAAGGGCGTCCAGGTAGGCAACAACGTCAGCCACGCCAACAACAAGACCAAGCGTCGTTTCCTGCCCAACCTGTGCCAGGTAACGCTCATTTCCGACGCCCTCGGCCAGCGTTTCCGTCTGCGCGTTTCCGCTGCAGCCCTGCGCTCCGTCGAGCATCGTGGTGGTCTCGATGCGTTCCTGTTGAAGGCCAGCGAGAACGAACTGAGCATGCGCGCCCGCCTGCTGCGTCGTCAGATTGCCAAGAAGTCTGCAGAAGTCGCAGCCGCCGCTTAA
PROTEIN sequence
Length: 100
MSRVCELTGKGVQVGNNVSHANNKTKRRFLPNLCQVTLISDALGQRFRLRVSAAALRSVEHRGGLDAFLLKASENELSMRARLLRRQIAKKSAEVAAAA*