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SCNpilot_expt_1000_bf_scaffold_4470_curated_19

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 15977..16633

Top 3 Functional Annotations

Value Algorithm Source
cation transporter n=1 Tax=Rhizobium leguminosarum RepID=UPI00036788F3 similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 218.0
  • Bit_score: 388
  • Evalue 4.70e-105
Cation efflux system protein (Heavy metal efflux pump), CzcA family {ECO:0000313|EMBL:KEC71362.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 218.0
  • Bit_score: 389
  • Evalue 2.30e-105
resistance nodulation cell division (RND) metal efflux pump, inner membrane component similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 218.0
  • Bit_score: 385
  • Evalue 1.30e-104

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGCCTCCAGGCTATTCCGTCGCCTGGAGCGGTCAGTTCGAATATCTCCAACGGGCCGAAGCACGACTGGCCGTCGTCGTTCCCCTGACCCTGGCCCTGATCTTCCTGCTGCTCTACCTGAACTTCAAGGCGCTGACGGAGACTGTCATCGTAATGCTGTCGCTGCCGTTCGCGCTGGTCGGCGGCATCTGGCTGATGTGGTGGATGGGCTTCAACGCCTCGGTGGCGGTCGCCGTCGGCTTCATTGCCCTTGCAGGCGTGGCGGCGGAAACCGGGGTGATCATGTTGATCTATCTCGACCACGCCCTGAAGGAGCAACGCGAAGCCTGCGAACAGGAGGGTCGTTCCTTCTCGAAGCCGGACCTCAATCGGGCGATCATGGTCGGCGCGGTCGAGCGCGTCCGACCGAAGATGATGACCGTCGCCGCCATCATGGCCGGCCTCGTGCCGATCCTGTGGAGGACCGGCACGGGATCGGAGATCATGCAACGGATCGCCGTACCGATGATCGGCGGCATGGTGTCGTCGACGCTGCTGACGCTGGTCGTCATTCCGGCCGTCTATGGGCTGATCAAGGGATGGCGACTGCCAGCCGCATCCGAAGCGGATCATGCTGTAACCGAGAACCAGAGGCGCAGTCTGCAGGCTGCTGAATGA
PROTEIN sequence
Length: 219
MPPGYSVAWSGQFEYLQRAEARLAVVVPLTLALIFLLLYLNFKALTETVIVMLSLPFALVGGIWLMWWMGFNASVAVAVGFIALAGVAAETGVIMLIYLDHALKEQREACEQEGRSFSKPDLNRAIMVGAVERVRPKMMTVAAIMAGLVPILWRTGTGSEIMQRIAVPMIGGMVSSTLLTLVVIPAVYGLIKGWRLPAASEADHAVTENQRRSLQAAE*