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SCNpilot_expt_1000_bf_scaffold_7391_curated_3

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 3388..3702

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=1 Tax=Rhizobium mongolense RepID=UPI0003B4FA0B similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 104.0
  • Bit_score: 189
  • Evalue 2.00e-45
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 104.0
  • Bit_score: 188
  • Evalue 8.30e-46
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 104.0
  • Bit_score: 188
  • Evalue 3.70e-45

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGTTCGCAGTCATCAAGACCGGCGGTAAGCAGTACCGCGTGGCAGCCAACGACGTGCTGACCATCGAAAAGCTTGATGTCGCCGCCGGCGACAGCATCGAATTCACCGAGGTTCTCGTGGTCGGCGTCGGCGCCGATGCGACGTTCGGCGCGCCCTTCGTGGCTGGCGCTTCGGTCAAGGCCGAAGTTGTCGAGCACAACCGCGGCAAGAAGGTCATTTCCTTCAAGAAGCGTCGTCGCCAGAACTCCAAGCGTTCGCGCGGCCATCGTCAGCATCACACGGTCGTCCGCATCACGGACATCGTGGCAGCCTAA
PROTEIN sequence
Length: 105
MFAVIKTGGKQYRVAANDVLTIEKLDVAAGDSIEFTEVLVVGVGADATFGAPFVAGASVKAEVVEHNRGKKVISFKKRRRQNSKRSRGHRQHHTVVRITDIVAA*