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SCNpilot_expt_1000_bf_scaffold_700_curated_12

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 12422..15922

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 999.99
  • Bit_score: 1946
  • Evalue 0.0
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 999.99
  • Bit_score: 1941
  • Evalue 0.0
DNA polymerase III subunit alpha n=1 Tax=Rhizobium phaseoli RepID=UPI000311D639 similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 999.99
  • Bit_score: 1946
  • Evalue 0.0

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3501
ATGGCGACGGTAGGGGCTGTATCGGGCGTCGGAGGCGAAAGCCGGGACGCGCTGGAATTCGTCCATCTGCGGGTTCATTCTGCCTATTCCCTGCTTGAGGGCGCGTTGCCACTCAAGAAGATCCTGAGCAAGGCTGCTGCCGACGGCCAGCCGGCAATTGCCATCACCGATACCAACAATCTCTTCGTTGCGCTGGAATTTTCCGAGAAGGCTGTCGGCGAGGGTCTGCAACCGATCATCGGTTGCCAGGTGTCGATCGACATGGAGGACGGACAGGAGACCGACAAGCGCGGCCTGCAATCCTTCGTCAAGCTGCCGTCGGTGGTATTGCTCGCCGCCAATGCGGTCGGATACGAAAATCTCGTCGACCTCGTCAGCCGCGCCTATCTCGGCGGCGAGGGCAATGGCTCCGTCAATATTCGCCTGTCCTGGCTGCAGGAAGGCGGCACCGACGGCTTGATCGTGCTGACCGGCGGCGTCGGCGGTCCCGTTGACATCGCCTCGAGGGAGGGGCATGCGGCGATGGCCGAACAGCGCCTCTTGACGCTGAAGGCGCTGTTCGGCGATCGGCTTTACATCGAGTTGCAGCGGCATGGCAATTACGACCGGCGACATGAAGCGAGAATGGTCGATCTCGCTTACGCCCATGACGTACCTCTGGTGGCCACCAACGAAGCGTTTTTTCCGTCTCCCGATGATTTCGATGCCCATGATGCGCTGATGGCGGTGGCACACAATGCGATCGTCTCCGACGACAGCCGGTTTCGCTTGACGCCGGACCATTATCTGAAAAGCCGCGCGGATATGGCCAGGCTGTTTGCGGACCTGCCGGAAGCTTTGGAGAATACGGTGGAGATCGCCCGGCGATGCTCGTTCGTGCTCAAGACCCGCAAGCCGATCCTGCCGCGCTTCACCAGCGCGGCGACAAGCGACGAGGAGGAGGCCGATCGCGCCGAAGGGGCGGAATTGCGCCGACAGGCCGAAGAAGGCCTCGACCACCGCCTGGCGACGCTCGGCATGGCGGAAGGGTACGACGAGAAGGACTATCGCGAGCGGTTGCAGTTCGAACTCGGCGTCATCGAACGCATGAAGTTTCCGGGCTACTTCCTGATCGTTGCCGACTTCATCAAATGGGCGAAGCAGCAGGATATCCCGGTCGGTCCGGGGCGTGGTTCGGGTGCGGGCTCGCTCGTCGCTTATGCGCTGACGATCACCGACGTCGATCCGTTGCGATTCTCGCTGCTGTTCGAACGCTTTCTCAATCCGGACCGCGTGTCGATGCCGGACTTCGACATCGACTTCTGCCAGGACCGGCGCGAAGAGGTGATCCGCTACGTCCAGCAGAAATACGGCCGCGAGCAGGTGGCGCAGATCATCACCTTCGGTTCGCTGCAGGCGCGCGCCGCGCTGCGTGACGTCGGTCGCGTGCTTGAGATGCCTTACGGCCAGGTCGACAAGATCTGCAAGCTCGTGCCCAACAATCCGGCCAATCCGACACCGCTGTACAAGGCGATCGAGGAGGAGCCGAAACTGCGGGAGGAGGCGGAAAAGGAACCCGTCGTCGCCCGCCTGCTGGATATCGCCCAGAAGATCGAAGGCCTTTACCGGCACGCCTCGACCCATGCCGCCGGCATCGTCATCGGCGATAGGCCGCTGTCGAAGCTGGTGCCGATGTACCGCGATCCGCGGTCGGACATGCCGGTCACCCAGTTCAACATGAAATGGGTCGAGCAGGCGGGCCTGGTGAAGTTCGACTTCCTCGGCCTCAAGACGCTGACCGTGCTGAAGACCGGTGTCGATTTCATCGCCAAGCGCGGCATCGAGGTGAAACTCGAAAGCCTGCCGCTGGACGACGCGAAAACCTACGAAATGATGTCGCGCGGCGAAACGGTCGGCATCTTCCAGGTGGAAAGTGCCGGCATGCGCAAGGCGCTGATCGGCATGCGCCCGGATTGCATCGAGGACATCATCGCGCTGGTGGCGCTCTATCGTCCGGGACCGATGGAAAACATCCCGGTCTATAACGCCCGCAAGCACGGCGAGGAGGAGATCGAGAGCATCCATCCGATGATCGACCACCTGCTCAAGGAAACGCAGGGCGTCATCGTCTACCAGGAGCAGGTGATGCAGATCGCCCAGGTCCTTTCGGGCTATTCGCTCGGCGAAGCCGATCTTCTGCGCCGCGCCATGGGCAAGAAGATCAAGGAGGAAATGGACAAGCAGCGCGAGCGTTTCGTCACCGGCGCCGTCAAGAACGGCGTGTCGAAACCGCAATCGGACCTGATCTTCGACCTCTTGGCAAAGTTCGCCAATTACGGCTTCAACAAATCGCACGCGGCGGCCTACGCCATCGTCTCCTACCAGACGGCCTATCTCAAGGCGCATTACCCGGTGGAATTCCTCGCCGCGTCGATGACCTACGATATGTCGAACACCGACAAGCTCAACGATTTCCGGCAGGATGCCAAGCGGCTCGGCATCAAGGTGGTGCCGCCATCGGTCCAGACTTCGTTCCGGATGTTCGAAACCGGCGACAACTGCATCTTCTATTCGCTCGCGGCCATCAAGGGCGTCGGCGAAGCGGCCGTCGAGCACATCGTCGCGGTACGCGGCGACAAGCCTTTCGCCAGCATCGAGGATTTCTGCCTGCGCATCGATCCGAAGCAGGTGAACCGCCGCGTGTTCGAAAGCCTGATCTCGGCCGGCGCCTTCGATTGTTTCGGCCGCGACCGCGCCGAGATGATCGCCGGCCTCGACCGCATCATCGGTTATGCCCAGCGGGCGCAGGAAAACAAGACGAGCGGCCAGTCGGACATGTTCGGCTCGGGGGCCGCGACCGGGCCGGAAACCATCACCTTCCCCACCTTCGCGCCCTGGCTTGCCTCGGAAAAGATGCACCGCGAATTTCAGGTGCTCGGCTTCTATCTGTCGGCACACCCGCTGGATTCCTATGCGAGCCTGCTGTCGAAGATGCGGGTGCAGAGTTTTGCCGATTTTTCCGCTGCGGTGAAACAGGGTGCTTCCGCCGGACGACTGGCCGGCACGGTGACGATGAAGCAGGAGCGCAAGACGCGCACCGGCAACAAGATGGGCATCGTCTCCTTTTCCGATCCGTCCGGTCAGTACGAGGCGGTGCTGTTCTCCGAAGGCCTCAACCAGTACCGGGATCTTCTGGAGCCCGGAAAATCGCTGATCCTCACGGTCAATGCCGAAGAACGTCCCGAAGGCATCGGTCTCCGAATCCAGACGGCGCAATCGCTCGAGGAAAAATCGATCCAGATGCAGAAGGCCTTGCGCATCTATGTGCGCGACGCCGGACCGCTTCGAACGGTCGCCGCCCATCTCAACGCCAAGGGTGACGGCCTGGTGTCCTTCATCGTCATCAAGGAAGAGGGCCAGCGTGAGATCGAGGTGGCATTGACGGAAAAATACCGTATCTCGCCGGAAATCGCCGCTGCCTTGCGTTCCGCGCCGGGTGTGATCGACGTCGAGCTGGTCTGA
PROTEIN sequence
Length: 1167
MATVGAVSGVGGESRDALEFVHLRVHSAYSLLEGALPLKKILSKAAADGQPAIAITDTNNLFVALEFSEKAVGEGLQPIIGCQVSIDMEDGQETDKRGLQSFVKLPSVVLLAANAVGYENLVDLVSRAYLGGEGNGSVNIRLSWLQEGGTDGLIVLTGGVGGPVDIASREGHAAMAEQRLLTLKALFGDRLYIELQRHGNYDRRHEARMVDLAYAHDVPLVATNEAFFPSPDDFDAHDALMAVAHNAIVSDDSRFRLTPDHYLKSRADMARLFADLPEALENTVEIARRCSFVLKTRKPILPRFTSAATSDEEEADRAEGAELRRQAEEGLDHRLATLGMAEGYDEKDYRERLQFELGVIERMKFPGYFLIVADFIKWAKQQDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNPDRVSMPDFDIDFCQDRREEVIRYVQQKYGREQVAQIITFGSLQARAALRDVGRVLEMPYGQVDKICKLVPNNPANPTPLYKAIEEEPKLREEAEKEPVVARLLDIAQKIEGLYRHASTHAAGIVIGDRPLSKLVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKTGVDFIAKRGIEVKLESLPLDDAKTYEMMSRGETVGIFQVESAGMRKALIGMRPDCIEDIIALVALYRPGPMENIPVYNARKHGEEEIESIHPMIDHLLKETQGVIVYQEQVMQIAQVLSGYSLGEADLLRRAMGKKIKEEMDKQRERFVTGAVKNGVSKPQSDLIFDLLAKFANYGFNKSHAAAYAIVSYQTAYLKAHYPVEFLAASMTYDMSNTDKLNDFRQDAKRLGIKVVPPSVQTSFRMFETGDNCIFYSLAAIKGVGEAAVEHIVAVRGDKPFASIEDFCLRIDPKQVNRRVFESLISAGAFDCFGRDRAEMIAGLDRIIGYAQRAQENKTSGQSDMFGSGAATGPETITFPTFAPWLASEKMHREFQVLGFYLSAHPLDSYASLLSKMRVQSFADFSAAVKQGASAGRLAGTVTMKQERKTRTGNKMGIVSFSDPSGQYEAVLFSEGLNQYRDLLEPGKSLILTVNAEERPEGIGLRIQTAQSLEEKSIQMQKALRIYVRDAGPLRTVAAHLNAKGDGLVSFIVIKEEGQREIEVALTEKYRISPEIAAALRSAPGVIDVELV*